Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 AL390719.1-204ENST00000412397 1219 ntBASIC18.56■□□□□ 0.56
PDCD4Q53EL6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDCD4Q53EL6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 AC005829.2-201ENST00000571422 1056 ntBASIC18.55■□□□□ 0.56
PDCD4Q53EL6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDCD4Q53EL6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 AC026271.2-201ENST00000428091 497 ntBASIC18.54■□□□□ 0.56
PDCD4Q53EL6 RARRES2P6-201ENST00000567333 442 ntBASIC18.54■□□□□ 0.56
PDCD4Q53EL6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDCD4Q53EL6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 AC093525.10-201ENST00000625130 1569 ntBASIC18.53■□□□□ 0.56
PDCD4Q53EL6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 AC104417.2-201ENST00000562989 1793 ntBASIC18.53■□□□□ 0.56
PDCD4Q53EL6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.53■□□□□ 0.56
PDCD4Q53EL6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms