Protein–RNA interactions for Protein: Q02413

DSG1, Desmoglein-1, humanhuman

Predictions only

Length 1,049 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSG1Q02413 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DSG1Q02413 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DSG1Q02413 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DSG1Q02413 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
DSG1Q02413 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DSG1Q02413 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.68■□□□□ 0.9
DSG1Q02413 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.68■□□□□ 0.9
DSG1Q02413 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.68■□□□□ 0.9
DSG1Q02413 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
DSG1Q02413 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DSG1Q02413 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DSG1Q02413 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.68■□□□□ 0.9
DSG1Q02413 SLC25A1P2-201ENST00000430693 912 ntBASIC20.68■□□□□ 0.9
DSG1Q02413 BX664615.1-201ENST00000443558 458 ntBASIC20.68■□□□□ 0.9
DSG1Q02413 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.68■□□□□ 0.9
DSG1Q02413 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.68■□□□□ 0.9
DSG1Q02413 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
DSG1Q02413 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
DSG1Q02413 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DSG1Q02413 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.68■□□□□ 0.9
DSG1Q02413 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DSG1Q02413 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.67■□□□□ 0.9
DSG1Q02413 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.67■□□□□ 0.9
DSG1Q02413 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DSG1Q02413 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
DSG1Q02413 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
DSG1Q02413 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.67■□□□□ 0.9
DSG1Q02413 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DSG1Q02413 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
DSG1Q02413 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DSG1Q02413 CCR12P-201ENST00000446203 998 ntBASIC20.67■□□□□ 0.9
DSG1Q02413 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.67■□□□□ 0.9
DSG1Q02413 AL160286.2-201ENST00000567150 934 ntBASIC20.67■□□□□ 0.9
DSG1Q02413 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
DSG1Q02413 WWOX-216ENST00000569818 525 ntBASIC20.67■□□□□ 0.9
DSG1Q02413 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DSG1Q02413 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
DSG1Q02413 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
DSG1Q02413 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
DSG1Q02413 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DSG1Q02413 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DSG1Q02413 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DSG1Q02413 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DSG1Q02413 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.67■□□□□ 0.9
DSG1Q02413 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DSG1Q02413 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DSG1Q02413 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.66■□□□□ 0.9
DSG1Q02413 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
DSG1Q02413 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
DSG1Q02413 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
DSG1Q02413 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
DSG1Q02413 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.66■□□□□ 0.9
DSG1Q02413 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.66■□□□□ 0.9
DSG1Q02413 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
DSG1Q02413 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.66■□□□□ 0.9
DSG1Q02413 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.66■□□□□ 0.9
DSG1Q02413 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DSG1Q02413 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DSG1Q02413 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DSG1Q02413 FEM1AP1-201ENST00000431297 1995 ntBASIC20.65■□□□□ 0.9
DSG1Q02413 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DSG1Q02413 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DSG1Q02413 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DSG1Q02413 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.65■□□□□ 0.9
DSG1Q02413 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
DSG1Q02413 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DSG1Q02413 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.65■□□□□ 0.9
DSG1Q02413 AC010653.2-201ENST00000623505 997 ntBASIC20.65■□□□□ 0.9
DSG1Q02413 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.65■□□□□ 0.9
DSG1Q02413 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DSG1Q02413 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.65■□□□□ 0.9
DSG1Q02413 LINC01006-201ENST00000333319 2292 ntBASIC20.65■□□□□ 0.9
DSG1Q02413 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DSG1Q02413 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
DSG1Q02413 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.64■□□□□ 0.9
DSG1Q02413 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.64■□□□□ 0.89
DSG1Q02413 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
DSG1Q02413 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DSG1Q02413 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.64■□□□□ 0.89
DSG1Q02413 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DSG1Q02413 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DSG1Q02413 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.64■□□□□ 0.89
DSG1Q02413 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.64■□□□□ 0.89
DSG1Q02413 AL138966.2-201ENST00000621997 464 ntBASIC20.64■□□□□ 0.89
DSG1Q02413 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DSG1Q02413 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.64■□□□□ 0.89
DSG1Q02413 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DSG1Q02413 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DSG1Q02413 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms