Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB5BP61020 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB5BP61020 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB5BP61020 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 AD000864.1-201ENST00000624076 2295 ntBASIC15.19■□□□□ 0.02
RAB5BP61020 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB5BP61020 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RAB5BP61020 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.19■□□□□ 0.02
RAB5BP61020 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB5BP61020 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 AC008764.6-201ENST00000595909 2069 ntBASIC15.19■□□□□ 0.02
RAB5BP61020 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
RAB5BP61020 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB5BP61020 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
RAB5BP61020 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 AC012317.2-201ENST00000623305 2251 ntBASIC15.19■□□□□ 0.02
RAB5BP61020 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RAB5BP61020 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RAB5BP61020 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RAB5BP61020 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 AC126763.1-201ENST00000552015 2118 ntBASIC15.19■□□□□ 0.02
RAB5BP61020 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB5BP61020 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB5BP61020 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB5BP61020 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 AC063926.3-201ENST00000624734 5658 ntBASIC15.18■□□□□ 0.02
RAB5BP61020 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB5BP61020 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB5BP61020 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB5BP61020 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB5BP61020 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB5BP61020 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB5BP61020 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB5BP61020 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 AC009831.1-201ENST00000580420 1582 ntBASIC15.18■□□□□ 0.02
RAB5BP61020 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RAB5BP61020 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
RAB5BP61020 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB5BP61020 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB5BP61020 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB5BP61020 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 AL118508.1-201ENST00000613502 2345 ntBASIC15.17■□□□□ 0.02
RAB5BP61020 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
RAB5BP61020 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.17■□□□□ 0.02
RAB5BP61020 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB5BP61020 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RAB5BP61020 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
RAB5BP61020 CEP120-209ENST00000515110 606 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB5BP61020 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB5BP61020 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RAB5BP61020 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB5BP61020 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAB5BP61020 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RAB5BP61020 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAB5BP61020 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB5BP61020 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB5BP61020 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms