Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.99■□□□□ 0.31
FOXG1P55316 B3GAT3P1-201ENST00000471720 806 ntBASIC16.99■□□□□ 0.31
FOXG1P55316 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.99■□□□□ 0.31
FOXG1P55316 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
FOXG1P55316 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXG1P55316 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXG1P55316 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXG1P55316 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXG1P55316 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXG1P55316 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXG1P55316 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXG1P55316 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXG1P55316 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.99■□□□□ 0.31
FOXG1P55316 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXG1P55316 AC079598.2-202ENST00000546624 1451 ntBASIC16.99■□□□□ 0.31
FOXG1P55316 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
FOXG1P55316 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXG1P55316 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
FOXG1P55316 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 RCC2P6-201ENST00000526625 1557 ntBASIC16.98■□□□□ 0.31
FOXG1P55316 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
FOXG1P55316 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXG1P55316 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 RBM17P1-201ENST00000453646 1190 ntBASIC16.98■□□□□ 0.31
FOXG1P55316 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
FOXG1P55316 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXG1P55316 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.98■□□□□ 0.31
FOXG1P55316 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXG1P55316 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.98■□□□□ 0.31
FOXG1P55316 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 AC007952.6-201ENST00000573168 2673 ntBASIC16.98■□□□□ 0.31
FOXG1P55316 AC003957.1-201ENST00000625108 2673 ntBASIC16.98■□□□□ 0.31
FOXG1P55316 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXG1P55316 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXG1P55316 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
FOXG1P55316 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXG1P55316 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXG1P55316 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXG1P55316 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
FOXG1P55316 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXG1P55316 KRT8P41-201ENST00000533985 1514 ntBASIC16.97■□□□□ 0.31
FOXG1P55316 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXG1P55316 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXG1P55316 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
FOXG1P55316 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
FOXG1P55316 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXG1P55316 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXG1P55316 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
FOXG1P55316 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXG1P55316 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXG1P55316 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXG1P55316 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
FOXG1P55316 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXG1P55316 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXG1P55316 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXG1P55316 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
FOXG1P55316 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXG1P55316 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXG1P55316 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
FOXG1P55316 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
FOXG1P55316 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.97■□□□□ 0.31
FOXG1P55316 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXG1P55316 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXG1P55316 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXG1P55316 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXG1P55316 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXG1P55316 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXG1P55316 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXG1P55316 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXG1P55316 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXG1P55316 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXG1P55316 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXG1P55316 AL390955.1-201ENST00000428694 934 ntBASIC16.96■□□□□ 0.31
FOXG1P55316 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXG1P55316 AC091390.4-202ENST00000476426 537 ntBASIC16.96■□□□□ 0.31
FOXG1P55316 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXG1P55316 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXG1P55316 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
FOXG1P55316 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXG1P55316 AP000525.1-201ENST00000608286 694 ntBASIC16.96■□□□□ 0.31
FOXG1P55316 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXG1P55316 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXG1P55316 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXG1P55316 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
FOXG1P55316 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
FOXG1P55316 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
FOXG1P55316 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.3
FOXG1P55316 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms