Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RAB28P51157 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RAB28P51157 KRT17P2-201ENST00000300992 1314 ntBASIC18.72■□□□□ 0.59
RAB28P51157 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB28P51157 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB28P51157 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB28P51157 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB28P51157 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB28P51157 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB28P51157 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB28P51157 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB28P51157 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB28P51157 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB28P51157 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB28P51157 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB28P51157 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB28P51157 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB28P51157 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAB28P51157 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB28P51157 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB28P51157 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB28P51157 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB28P51157 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB28P51157 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB28P51157 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB28P51157 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB28P51157 Z85996.1-201ENST00000494644 937 ntBASIC18.7■□□□□ 0.58
RAB28P51157 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB28P51157 AP003071.4-201ENST00000562276 1284 ntBASIC18.7■□□□□ 0.58
RAB28P51157 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB28P51157 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RAB28P51157 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB28P51157 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB28P51157 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAB28P51157 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB28P51157 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB28P51157 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RAB28P51157 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RAB28P51157 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB28P51157 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB28P51157 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB28P51157 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB28P51157 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB28P51157 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB28P51157 AC116562.2-201ENST00000507042 360 ntBASIC18.69■□□□□ 0.58
RAB28P51157 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.69■□□□□ 0.58
RAB28P51157 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.69■□□□□ 0.58
RAB28P51157 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB28P51157 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.69■□□□□ 0.58
RAB28P51157 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.69■□□□□ 0.58
RAB28P51157 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB28P51157 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB28P51157 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
RAB28P51157 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RAB28P51157 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB28P51157 FSCN1P1-201ENST00000568912 1481 ntBASIC18.69■□□□□ 0.58
RAB28P51157 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB28P51157 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB28P51157 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.69■□□□□ 0.58
RAB28P51157 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RAB28P51157 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB28P51157 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB28P51157 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RAB28P51157 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB28P51157 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB28P51157 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAB28P51157 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
RAB28P51157 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.68■□□□□ 0.58
RAB28P51157 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB28P51157 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.68■□□□□ 0.58
RAB28P51157 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB28P51157 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB28P51157 MIR6786-201ENST00000616843 113 ntBASIC18.68■□□□□ 0.58
RAB28P51157 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB28P51157 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB28P51157 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB28P51157 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB28P51157 RCC2P6-201ENST00000526625 1557 ntBASIC18.68■□□□□ 0.58
RAB28P51157 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB28P51157 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RAB28P51157 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB28P51157 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB28P51157 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB28P51157 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB28P51157 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RAB28P51157 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB28P51157 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms