Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 PMS2P1-201ENST00000431037 1228 ntBASIC34.33■■■■□ 3.09
NCAPD3P42695 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC34.33■■■■□ 3.09
NCAPD3P42695 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
NCAPD3P42695 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
NCAPD3P42695 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
NCAPD3P42695 BID-203ENST00000399765 1879 ntTSL 2 BASIC34.32■■■■□ 3.08
NCAPD3P42695 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
NCAPD3P42695 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
NCAPD3P42695 KRT16P4-201ENST00000453883 522 ntBASIC34.32■■■■□ 3.08
NCAPD3P42695 AP001271.2-201ENST00000624018 1556 ntBASIC34.32■■■■□ 3.08
NCAPD3P42695 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
NCAPD3P42695 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
NCAPD3P42695 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
NCAPD3P42695 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC34.31■■■■□ 3.08
NCAPD3P42695 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
NCAPD3P42695 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
NCAPD3P42695 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC34.31■■■■□ 3.08
NCAPD3P42695 PNN-202ENST00000553331 656 ntTSL 3 BASIC34.31■■■■□ 3.08
NCAPD3P42695 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC34.31■■■■□ 3.08
NCAPD3P42695 SPEG-225ENST00000617028 815 ntTSL 5 BASIC34.31■■■■□ 3.08
NCAPD3P42695 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC34.31■■■■□ 3.08
NCAPD3P42695 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC34.31■■■■□ 3.08
NCAPD3P42695 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC34.31■■■■□ 3.08
NCAPD3P42695 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
NCAPD3P42695 FOSL1P1-201ENST00000511041 816 ntBASIC34.3■■■■□ 3.08
NCAPD3P42695 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC34.3■■■■□ 3.08
NCAPD3P42695 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
NCAPD3P42695 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC34.3■■■■□ 3.08
NCAPD3P42695 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC34.3■■■■□ 3.08
NCAPD3P42695 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
NCAPD3P42695 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
NCAPD3P42695 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
NCAPD3P42695 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
NCAPD3P42695 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC34.29■■■■□ 3.08
NCAPD3P42695 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC34.29■■■■□ 3.08
NCAPD3P42695 FEM1AP1-201ENST00000431297 1995 ntBASIC34.29■■■■□ 3.08
NCAPD3P42695 AKR1C7P-201ENST00000305623 895 ntBASIC34.29■■■■□ 3.08
NCAPD3P42695 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
NCAPD3P42695 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC34.29■■■■□ 3.08
NCAPD3P42695 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC34.29■■■■□ 3.08
NCAPD3P42695 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC34.29■■■■□ 3.08
NCAPD3P42695 NME4-212ENST00000621774 904 ntTSL 3 BASIC34.29■■■■□ 3.08
NCAPD3P42695 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
NCAPD3P42695 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
NCAPD3P42695 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC34.29■■■■□ 3.08
NCAPD3P42695 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC34.29■■■■□ 3.08
NCAPD3P42695 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC34.29■■■■□ 3.08
NCAPD3P42695 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC34.28■■■■□ 3.08
NCAPD3P42695 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC34.28■■■■□ 3.08
NCAPD3P42695 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
NCAPD3P42695 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
NCAPD3P42695 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
NCAPD3P42695 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
NCAPD3P42695 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC34.28■■■■□ 3.08
NCAPD3P42695 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC34.28■■■■□ 3.08
NCAPD3P42695 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC34.28■■■■□ 3.08
NCAPD3P42695 SEC1P-202ENST00000473944 940 ntBASIC34.28■■■■□ 3.08
NCAPD3P42695 AC092720.2-201ENST00000602388 1665 ntBASIC34.28■■■■□ 3.08
NCAPD3P42695 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
NCAPD3P42695 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC34.28■■■■□ 3.08
NCAPD3P42695 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
NCAPD3P42695 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
NCAPD3P42695 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC34.28■■■■□ 3.08
NCAPD3P42695 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC34.28■■■■□ 3.08
NCAPD3P42695 TOB2P1-201ENST00000469761 992 ntBASIC34.27■■■■□ 3.08
NCAPD3P42695 PENK-208ENST00000523051 772 ntTSL 5 BASIC34.27■■■■□ 3.08
NCAPD3P42695 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC34.27■■■■□ 3.08
NCAPD3P42695 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
NCAPD3P42695 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
NCAPD3P42695 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
NCAPD3P42695 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
NCAPD3P42695 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
NCAPD3P42695 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
NCAPD3P42695 LINC00265-3P-201ENST00000447588 903 ntBASIC34.27■■■■□ 3.08
NCAPD3P42695 PPIE-208ENST00000470213 927 ntTSL 3 BASIC34.27■■■■□ 3.08
NCAPD3P42695 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
NCAPD3P42695 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC34.27■■■■□ 3.08
NCAPD3P42695 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
NCAPD3P42695 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
NCAPD3P42695 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC34.26■■■■□ 3.08
NCAPD3P42695 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
NCAPD3P42695 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC34.26■■■■□ 3.08
NCAPD3P42695 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
NCAPD3P42695 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC34.26■■■■□ 3.07
NCAPD3P42695 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
NCAPD3P42695 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
NCAPD3P42695 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC34.26■■■■□ 3.07
NCAPD3P42695 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
NCAPD3P42695 TSPY22P-201ENST00000427496 604 ntBASIC34.26■■■■□ 3.07
NCAPD3P42695 RNF126P1-202ENST00000569893 925 ntBASIC34.26■■■■□ 3.07
NCAPD3P42695 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
NCAPD3P42695 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC34.26■■■■□ 3.07
NCAPD3P42695 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
NCAPD3P42695 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC34.25■■■■□ 3.07
NCAPD3P42695 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC34.25■■■■□ 3.07
NCAPD3P42695 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
NCAPD3P42695 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC34.25■■■■□ 3.07
NCAPD3P42695 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC34.25■■■■□ 3.07
NCAPD3P42695 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC34.25■■■■□ 3.07
NCAPD3P42695 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC34.25■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms