Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GRIK1P39086 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GRIK1P39086 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
GRIK1P39086 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
GRIK1P39086 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GRIK1P39086 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GRIK1P39086 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GRIK1P39086 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GRIK1P39086 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GRIK1P39086 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
GRIK1P39086 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GRIK1P39086 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GRIK1P39086 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GRIK1P39086 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GRIK1P39086 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.4■□□□□ 0.86
GRIK1P39086 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.4■□□□□ 0.86
GRIK1P39086 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.4■□□□□ 0.86
GRIK1P39086 AC091390.4-202ENST00000476426 537 ntBASIC20.4■□□□□ 0.86
GRIK1P39086 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.4■□□□□ 0.86
GRIK1P39086 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.4■□□□□ 0.86
GRIK1P39086 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.4■□□□□ 0.86
GRIK1P39086 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.4■□□□□ 0.86
GRIK1P39086 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GRIK1P39086 AP000692.2-201ENST00000608391 879 ntBASIC20.4■□□□□ 0.86
GRIK1P39086 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GRIK1P39086 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.4■□□□□ 0.86
GRIK1P39086 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.4■□□□□ 0.86
GRIK1P39086 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIK1P39086 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.4■□□□□ 0.86
GRIK1P39086 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
GRIK1P39086 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
GRIK1P39086 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.39■□□□□ 0.86
GRIK1P39086 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.39■□□□□ 0.86
GRIK1P39086 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GRIK1P39086 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GRIK1P39086 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.39■□□□□ 0.85
GRIK1P39086 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GRIK1P39086 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.39■□□□□ 0.85
GRIK1P39086 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.39■□□□□ 0.85
GRIK1P39086 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
GRIK1P39086 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
GRIK1P39086 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
GRIK1P39086 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GRIK1P39086 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.39■□□□□ 0.85
GRIK1P39086 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.39■□□□□ 0.85
GRIK1P39086 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.39■□□□□ 0.85
GRIK1P39086 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.39■□□□□ 0.85
GRIK1P39086 NAPSB-206ENST00000562112 1266 ntBASIC20.39■□□□□ 0.85
GRIK1P39086 AC097493.4-201ENST00000641197 219 ntBASIC20.39■□□□□ 0.85
GRIK1P39086 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GRIK1P39086 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GRIK1P39086 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
GRIK1P39086 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.39■□□□□ 0.85
GRIK1P39086 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GRIK1P39086 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.39■□□□□ 0.85
GRIK1P39086 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GRIK1P39086 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GRIK1P39086 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GRIK1P39086 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GRIK1P39086 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.38■□□□□ 0.85
GRIK1P39086 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIK1P39086 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.38■□□□□ 0.85
GRIK1P39086 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIK1P39086 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIK1P39086 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIK1P39086 CYP2D8P-201ENST00000433633 1490 ntBASIC20.38■□□□□ 0.85
GRIK1P39086 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.38■□□□□ 0.85
GRIK1P39086 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIK1P39086 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIK1P39086 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
GRIK1P39086 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
GRIK1P39086 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.38■□□□□ 0.85
GRIK1P39086 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
GRIK1P39086 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.38■□□□□ 0.85
GRIK1P39086 AC012306.2-201ENST00000609350 630 ntBASIC20.38■□□□□ 0.85
GRIK1P39086 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.38■□□□□ 0.85
GRIK1P39086 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.38■□□□□ 0.85
GRIK1P39086 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
GRIK1P39086 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GRIK1P39086 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIK1P39086 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIK1P39086 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.38■□□□□ 0.85
GRIK1P39086 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIK1P39086 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.38■□□□□ 0.85
GRIK1P39086 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIK1P39086 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
GRIK1P39086 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
GRIK1P39086 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIK1P39086 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms