Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTGFP29279 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTGFP29279 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTGFP29279 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTGFP29279 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.89■■□□□ 1.09
CTGFP29279 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.89■■□□□ 1.09
CTGFP29279 AL121672.3-201ENST00000608644 468 ntBASIC21.89■■□□□ 1.09
CTGFP29279 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CTGFP29279 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTGFP29279 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.89■■□□□ 1.09
CTGFP29279 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTGFP29279 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CTGFP29279 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTGFP29279 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.88■■□□□ 1.09
CTGFP29279 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTGFP29279 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTGFP29279 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTGFP29279 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.88■■□□□ 1.09
CTGFP29279 AC079781.3-201ENST00000449110 356 ntBASIC21.88■■□□□ 1.09
CTGFP29279 BX276092.5-203ENST00000456199 560 ntBASIC21.88■■□□□ 1.09
CTGFP29279 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.88■■□□□ 1.09
CTGFP29279 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.88■■□□□ 1.09
CTGFP29279 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.88■■□□□ 1.09
CTGFP29279 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.88■■□□□ 1.09
CTGFP29279 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.88■■□□□ 1.09
CTGFP29279 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CTGFP29279 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTGFP29279 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.88■■□□□ 1.09
CTGFP29279 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTGFP29279 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.87■■□□□ 1.09
CTGFP29279 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CTGFP29279 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 AL022342.1-201ENST00000400363 863 ntBASIC21.87■■□□□ 1.09
CTGFP29279 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.87■■□□□ 1.09
CTGFP29279 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.87■■□□□ 1.09
CTGFP29279 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.87■■□□□ 1.09
CTGFP29279 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.87■■□□□ 1.09
CTGFP29279 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CTGFP29279 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CTGFP29279 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CTGFP29279 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.87■■□□□ 1.09
CTGFP29279 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.87■■□□□ 1.09
CTGFP29279 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTGFP29279 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CTGFP29279 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CTGFP29279 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.86■■□□□ 1.09
CTGFP29279 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.86■■□□□ 1.09
CTGFP29279 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTGFP29279 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CTGFP29279 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTGFP29279 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTGFP29279 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CTGFP29279 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.86■■□□□ 1.09
CTGFP29279 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.86■■□□□ 1.09
CTGFP29279 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CTGFP29279 NUS1P1-201ENST00000446295 882 ntBASIC21.86■■□□□ 1.09
CTGFP29279 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CTGFP29279 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.86■■□□□ 1.09
CTGFP29279 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.86■■□□□ 1.09
CTGFP29279 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.86■■□□□ 1.09
CTGFP29279 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CTGFP29279 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
CTGFP29279 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.86■■□□□ 1.09
CTGFP29279 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTGFP29279 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.86■■□□□ 1.09
CTGFP29279 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.85■■□□□ 1.09
CTGFP29279 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CTGFP29279 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTGFP29279 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CTGFP29279 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTGFP29279 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTGFP29279 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTGFP29279 TSPY19P-201ENST00000418461 509 ntBASIC21.85■■□□□ 1.09
CTGFP29279 TSPY18P-201ENST00000441642 509 ntBASIC21.85■■□□□ 1.09
CTGFP29279 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.85■■□□□ 1.09
CTGFP29279 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.85■■□□□ 1.09
CTGFP29279 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.85■■□□□ 1.09
CTGFP29279 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.85■■□□□ 1.09
CTGFP29279 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTGFP29279 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTGFP29279 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.85■■□□□ 1.09
CTGFP29279 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CTGFP29279 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CTGFP29279 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CTGFP29279 AP001271.2-201ENST00000624018 1556 ntBASIC21.85■■□□□ 1.09
CTGFP29279 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CTGFP29279 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.85■■□□□ 1.09
CTGFP29279 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CTGFP29279 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms