Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.37■□□□□ 0.85
MMP8P22894 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.37■□□□□ 0.85
MMP8P22894 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP8P22894 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP8P22894 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MMP8P22894 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
MMP8P22894 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MMP8P22894 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.37■□□□□ 0.85
MMP8P22894 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP8P22894 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.37■□□□□ 0.85
MMP8P22894 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP8P22894 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP8P22894 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP8P22894 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP8P22894 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.36■□□□□ 0.85
MMP8P22894 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.36■□□□□ 0.85
MMP8P22894 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP8P22894 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP8P22894 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP8P22894 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MMP8P22894 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP8P22894 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP8P22894 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MMP8P22894 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MMP8P22894 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.36■□□□□ 0.85
MMP8P22894 TSPY20P-201ENST00000450910 630 ntBASIC20.36■□□□□ 0.85
MMP8P22894 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.36■□□□□ 0.85
MMP8P22894 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
MMP8P22894 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MMP8P22894 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP8P22894 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
MMP8P22894 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
MMP8P22894 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
MMP8P22894 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
MMP8P22894 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP8P22894 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP8P22894 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MMP8P22894 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP8P22894 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP8P22894 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP8P22894 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
MMP8P22894 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
MMP8P22894 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.35■□□□□ 0.85
MMP8P22894 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP8P22894 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP8P22894 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MMP8P22894 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP8P22894 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP8P22894 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
MMP8P22894 AL161938.1-201ENST00000569833 2180 ntBASIC20.35■□□□□ 0.85
MMP8P22894 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP8P22894 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
MMP8P22894 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP8P22894 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
MMP8P22894 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP8P22894 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP8P22894 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP8P22894 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP8P22894 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
MMP8P22894 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP8P22894 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP8P22894 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MMP8P22894 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
MMP8P22894 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.34■□□□□ 0.85
MMP8P22894 FAM201B-201ENST00000458407 597 ntBASIC20.34■□□□□ 0.85
MMP8P22894 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
MMP8P22894 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP8P22894 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.34■□□□□ 0.85
MMP8P22894 C1QBPP2-201ENST00000528754 825 ntBASIC20.34■□□□□ 0.85
MMP8P22894 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.34■□□□□ 0.85
MMP8P22894 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.34■□□□□ 0.85
MMP8P22894 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.34■□□□□ 0.85
MMP8P22894 ITM2C-210ENST00000620962 501 ntBASIC20.34■□□□□ 0.85
MMP8P22894 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP8P22894 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
MMP8P22894 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP8P22894 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP8P22894 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP8P22894 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP8P22894 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP8P22894 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP8P22894 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP8P22894 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MMP8P22894 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP8P22894 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP8P22894 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
MMP8P22894 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP8P22894 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP8P22894 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP8P22894 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MMP8P22894 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP8P22894 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP8P22894 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.33■□□□□ 0.85
MMP8P22894 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
MMP8P22894 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MMP8P22894 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.33■□□□□ 0.85
MMP8P22894 RPPH1-201ENST00000516869 333 ntBASIC20.33■□□□□ 0.85
MMP8P22894 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.33■□□□□ 0.85
MMP8P22894 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.33■□□□□ 0.85
MMP8P22894 AL160286.2-201ENST00000567150 934 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms