Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN3P20807 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN3P20807 KRT17P1-201ENST00000399211 1546 ntBASIC18.6■□□□□ 0.57
CAPN3P20807 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CAPN3P20807 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN3P20807 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN3P20807 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN3P20807 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CAPN3P20807 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 DUSP5P2-201ENST00000426873 1033 ntBASIC18.6■□□□□ 0.57
CAPN3P20807 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.6■□□□□ 0.57
CAPN3P20807 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN3P20807 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.6■□□□□ 0.57
CAPN3P20807 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.6■□□□□ 0.57
CAPN3P20807 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 AC009113.1-201ENST00000570267 2443 ntBASIC18.6■□□□□ 0.57
CAPN3P20807 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN3P20807 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CAPN3P20807 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 AC010980.2-201ENST00000587099 1412 ntBASIC18.59■□□□□ 0.57
CAPN3P20807 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CAPN3P20807 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.59■□□□□ 0.57
CAPN3P20807 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CAPN3P20807 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.59■□□□□ 0.57
CAPN3P20807 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.59■□□□□ 0.57
CAPN3P20807 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.59■□□□□ 0.57
CAPN3P20807 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.59■□□□□ 0.57
CAPN3P20807 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CAPN3P20807 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CAPN3P20807 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.59■□□□□ 0.57
CAPN3P20807 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.59■□□□□ 0.57
CAPN3P20807 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN3P20807 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CAPN3P20807 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.58■□□□□ 0.57
CAPN3P20807 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.58■□□□□ 0.57
CAPN3P20807 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.58■□□□□ 0.57
CAPN3P20807 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CAPN3P20807 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.58■□□□□ 0.57
CAPN3P20807 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN3P20807 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CAPN3P20807 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.58■□□□□ 0.57
CAPN3P20807 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CAPN3P20807 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN3P20807 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN3P20807 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN3P20807 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.58■□□□□ 0.56
CAPN3P20807 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CAPN3P20807 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.58■□□□□ 0.56
CAPN3P20807 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN3P20807 GCSHP5-201ENST00000443090 522 ntBASIC18.58■□□□□ 0.56
CAPN3P20807 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.58■□□□□ 0.56
CAPN3P20807 RPS2P4-201ENST00000476944 856 ntBASIC18.58■□□□□ 0.56
CAPN3P20807 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN3P20807 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.58■□□□□ 0.56
CAPN3P20807 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN3P20807 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN3P20807 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN3P20807 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN3P20807 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.58■□□□□ 0.56
CAPN3P20807 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.58■□□□□ 0.56
CAPN3P20807 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN3P20807 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN3P20807 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms