Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.68■■□□□ 1.54
SNRPA1P09661 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SNRPA1P09661 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SNRPA1P09661 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SNRPA1P09661 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SNRPA1P09661 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SNRPA1P09661 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
SNRPA1P09661 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SNRPA1P09661 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SNRPA1P09661 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SNRPA1P09661 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SNRPA1P09661 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.67■■□□□ 1.54
SNRPA1P09661 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.67■■□□□ 1.54
SNRPA1P09661 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC24.67■■□□□ 1.54
SNRPA1P09661 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.67■■□□□ 1.54
SNRPA1P09661 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.67■■□□□ 1.54
SNRPA1P09661 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC24.67■■□□□ 1.54
SNRPA1P09661 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SNRPA1P09661 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
SNRPA1P09661 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNRPA1P09661 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.66■■□□□ 1.54
SNRPA1P09661 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.66■■□□□ 1.54
SNRPA1P09661 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
SNRPA1P09661 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNRPA1P09661 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNRPA1P09661 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNRPA1P09661 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC24.66■■□□□ 1.54
SNRPA1P09661 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.66■■□□□ 1.54
SNRPA1P09661 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.66■■□□□ 1.54
SNRPA1P09661 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC24.66■■□□□ 1.54
SNRPA1P09661 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SNRPA1P09661 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC24.66■■□□□ 1.54
SNRPA1P09661 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.66■■□□□ 1.54
SNRPA1P09661 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.66■■□□□ 1.54
SNRPA1P09661 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
SNRPA1P09661 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNRPA1P09661 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SNRPA1P09661 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNRPA1P09661 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNRPA1P09661 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SNRPA1P09661 AL157384.1-201ENST00000445995 2473 ntBASIC24.66■■□□□ 1.54
SNRPA1P09661 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC24.66■■□□□ 1.54
SNRPA1P09661 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC24.65■■□□□ 1.54
SNRPA1P09661 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC24.65■■□□□ 1.54
SNRPA1P09661 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNRPA1P09661 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC24.65■■□□□ 1.54
SNRPA1P09661 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SNRPA1P09661 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SNRPA1P09661 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNRPA1P09661 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
SNRPA1P09661 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SNRPA1P09661 ZNF815P-204ENST00000434898 1737 ntBASIC24.65■■□□□ 1.54
SNRPA1P09661 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SNRPA1P09661 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC24.65■■□□□ 1.54
SNRPA1P09661 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC24.65■■□□□ 1.54
SNRPA1P09661 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
SNRPA1P09661 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
SNRPA1P09661 AL031432.5-201ENST00000641059 760 ntBASIC24.65■■□□□ 1.54
SNRPA1P09661 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SNRPA1P09661 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.65■■□□□ 1.54
SNRPA1P09661 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SNRPA1P09661 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.65■■□□□ 1.54
SNRPA1P09661 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNRPA1P09661 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SNRPA1P09661 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNRPA1P09661 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNRPA1P09661 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
SNRPA1P09661 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
SNRPA1P09661 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.64■■□□□ 1.54
SNRPA1P09661 KRT8P45-201ENST00000414328 1447 ntBASIC24.64■■□□□ 1.54
SNRPA1P09661 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC24.64■■□□□ 1.54
SNRPA1P09661 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNRPA1P09661 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC24.64■■□□□ 1.54
SNRPA1P09661 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNRPA1P09661 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC24.64■■□□□ 1.54
SNRPA1P09661 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.64■■□□□ 1.53
SNRPA1P09661 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
SNRPA1P09661 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SNRPA1P09661 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
SNRPA1P09661 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
SNRPA1P09661 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SNRPA1P09661 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.64■■□□□ 1.53
SNRPA1P09661 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.64■■□□□ 1.53
SNRPA1P09661 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.63■■□□□ 1.53
SNRPA1P09661 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.63■■□□□ 1.53
SNRPA1P09661 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNRPA1P09661 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNRPA1P09661 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNRPA1P09661 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNRPA1P09661 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNRPA1P09661 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC24.63■■□□□ 1.53
SNRPA1P09661 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.63■■□□□ 1.53
SNRPA1P09661 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.63■■□□□ 1.53
SNRPA1P09661 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNRPA1P09661 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SNRPA1P09661 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.63■■□□□ 1.53
SNRPA1P09661 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNRPA1P09661 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNRPA1P09661 LBX2-AS1-202ENST00000603175 2083 ntBASIC24.63■■□□□ 1.53
SNRPA1P09661 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms