Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.56■□□□□ 0.72
COL4A2P08572 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.56■□□□□ 0.72
COL4A2P08572 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL4A2P08572 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL4A2P08572 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL4A2P08572 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL4A2P08572 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.56■□□□□ 0.72
COL4A2P08572 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COL4A2P08572 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL4A2P08572 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL4A2P08572 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.56■□□□□ 0.72
COL4A2P08572 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL4A2P08572 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.56■□□□□ 0.72
COL4A2P08572 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
COL4A2P08572 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.56■□□□□ 0.72
COL4A2P08572 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL4A2P08572 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL4A2P08572 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL4A2P08572 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL4A2P08572 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.56■□□□□ 0.72
COL4A2P08572 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.56■□□□□ 0.72
COL4A2P08572 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.56■□□□□ 0.72
COL4A2P08572 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A2P08572 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
COL4A2P08572 AP005212.1-201ENST00000581547 1997 ntBASIC19.55■□□□□ 0.72
COL4A2P08572 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COL4A2P08572 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.55■□□□□ 0.72
COL4A2P08572 AC020907.5-201ENST00000624372 1936 ntBASIC19.55■□□□□ 0.72
COL4A2P08572 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A2P08572 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.55■□□□□ 0.72
COL4A2P08572 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A2P08572 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A2P08572 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.55■□□□□ 0.72
COL4A2P08572 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A2P08572 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.55■□□□□ 0.72
COL4A2P08572 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A2P08572 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A2P08572 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A2P08572 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A2P08572 AC009237.14-201ENST00000609975 1594 ntBASIC19.55■□□□□ 0.72
COL4A2P08572 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.55■□□□□ 0.72
COL4A2P08572 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A2P08572 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.54■□□□□ 0.72
COL4A2P08572 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A2P08572 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A2P08572 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A2P08572 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.54■□□□□ 0.72
COL4A2P08572 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.54■□□□□ 0.72
COL4A2P08572 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.54■□□□□ 0.72
COL4A2P08572 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL4A2P08572 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.54■□□□□ 0.72
COL4A2P08572 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.54■□□□□ 0.72
COL4A2P08572 AC073314.1-201ENST00000568729 2216 ntBASIC19.54■□□□□ 0.72
COL4A2P08572 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A2P08572 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A2P08572 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL4A2P08572 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A2P08572 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL4A2P08572 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A2P08572 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A2P08572 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A2P08572 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A2P08572 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.54■□□□□ 0.72
COL4A2P08572 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.53■□□□□ 0.72
COL4A2P08572 AC007375.3-201ENST00000600936 2314 ntBASIC19.53■□□□□ 0.72
COL4A2P08572 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A2P08572 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A2P08572 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COL4A2P08572 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.53■□□□□ 0.72
COL4A2P08572 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A2P08572 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A2P08572 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
COL4A2P08572 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
COL4A2P08572 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
COL4A2P08572 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.53■□□□□ 0.72
COL4A2P08572 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.53■□□□□ 0.72
COL4A2P08572 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.53■□□□□ 0.72
COL4A2P08572 MIR3180-1-201ENST00000580374 94 ntBASIC19.53■□□□□ 0.72
COL4A2P08572 MIR3180-3-201ENST00000584616 94 ntBASIC19.53■□□□□ 0.72
COL4A2P08572 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A2P08572 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL4A2P08572 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A2P08572 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.53■□□□□ 0.72
COL4A2P08572 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.53■□□□□ 0.72
COL4A2P08572 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.53■□□□□ 0.72
COL4A2P08572 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
COL4A2P08572 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
COL4A2P08572 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A2P08572 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL4A2P08572 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.52■□□□□ 0.72
COL4A2P08572 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COL4A2P08572 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A2P08572 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A2P08572 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COL4A2P08572 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A2P08572 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A2P08572 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
COL4A2P08572 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A2P08572 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.52■□□□□ 0.72
COL4A2P08572 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms