Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FEM1AP1-201ENST00000431297 1995 ntBASIC20.97■□□□□ 0.95
TIMP1P01033 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.97■□□□□ 0.95
TIMP1P01033 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.97■□□□□ 0.95
TIMP1P01033 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP1P01033 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP1P01033 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.97■□□□□ 0.95
TIMP1P01033 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP1P01033 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP1P01033 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP1P01033 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.97■□□□□ 0.95
TIMP1P01033 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.97■□□□□ 0.95
TIMP1P01033 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.97■□□□□ 0.95
TIMP1P01033 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP1P01033 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.97■□□□□ 0.95
TIMP1P01033 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TIMP1P01033 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP1P01033 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TIMP1P01033 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TIMP1P01033 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.96■□□□□ 0.95
TIMP1P01033 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TIMP1P01033 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.96■□□□□ 0.95
TIMP1P01033 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TIMP1P01033 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TIMP1P01033 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.96■□□□□ 0.95
TIMP1P01033 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TIMP1P01033 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TIMP1P01033 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.96■□□□□ 0.95
TIMP1P01033 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TIMP1P01033 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.96■□□□□ 0.95
TIMP1P01033 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TIMP1P01033 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
TIMP1P01033 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TIMP1P01033 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.96■□□□□ 0.95
TIMP1P01033 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TIMP1P01033 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TIMP1P01033 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TIMP1P01033 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TIMP1P01033 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.96■□□□□ 0.95
TIMP1P01033 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.96■□□□□ 0.95
TIMP1P01033 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
TIMP1P01033 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP1P01033 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP1P01033 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.95■□□□□ 0.94
TIMP1P01033 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP1P01033 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP1P01033 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.95■□□□□ 0.94
TIMP1P01033 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.95■□□□□ 0.94
TIMP1P01033 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.95■□□□□ 0.94
TIMP1P01033 AC006538.3-201ENST00000612495 578 ntBASIC20.95■□□□□ 0.94
TIMP1P01033 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.95■□□□□ 0.94
TIMP1P01033 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP1P01033 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.95■□□□□ 0.94
TIMP1P01033 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP1P01033 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP1P01033 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP1P01033 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP1P01033 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
TIMP1P01033 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP1P01033 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP1P01033 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.94■□□□□ 0.94
TIMP1P01033 AC009078.2-202ENST00000463353 338 ntBASIC20.94■□□□□ 0.94
TIMP1P01033 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.94■□□□□ 0.94
TIMP1P01033 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.94■□□□□ 0.94
TIMP1P01033 AP002414.4-201ENST00000589764 1148 ntBASIC20.94■□□□□ 0.94
TIMP1P01033 IFNL4P1-201ENST00000607083 540 ntBASIC20.94■□□□□ 0.94
TIMP1P01033 AC023511.2-201ENST00000618803 211 ntBASIC20.94■□□□□ 0.94
TIMP1P01033 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP1P01033 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP1P01033 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TIMP1P01033 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP1P01033 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP1P01033 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP1P01033 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP1P01033 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP1P01033 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP1P01033 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP1P01033 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP1P01033 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TIMP1P01033 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.93■□□□□ 0.94
TIMP1P01033 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP1P01033 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TIMP1P01033 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TIMP1P01033 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.93■□□□□ 0.94
TIMP1P01033 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP1P01033 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP1P01033 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP1P01033 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TIMP1P01033 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP1P01033 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP1P01033 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.93■□□□□ 0.94
TIMP1P01033 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.93■□□□□ 0.94
TIMP1P01033 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.93■□□□□ 0.94
TIMP1P01033 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TIMP1P01033 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP1P01033 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.92■□□□□ 0.94
TIMP1P01033 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TIMP1P01033 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TIMP1P01033 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms