Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBL3O95164 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.34■□□□□ 0.37
UBL3O95164 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBL3O95164 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBL3O95164 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBL3O95164 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.34■□□□□ 0.37
UBL3O95164 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL3O95164 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.34■□□□□ 0.37
UBL3O95164 AL121906.2-201ENST00000621597 723 ntBASIC17.34■□□□□ 0.37
UBL3O95164 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.34■□□□□ 0.37
UBL3O95164 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL3O95164 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL3O95164 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL3O95164 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL3O95164 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBL3O95164 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBL3O95164 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBL3O95164 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBL3O95164 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.33■□□□□ 0.37
UBL3O95164 AL138781.2-201ENST00000617896 1843 ntBASIC17.33■□□□□ 0.37
UBL3O95164 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
UBL3O95164 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBL3O95164 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
UBL3O95164 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL3O95164 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.33■□□□□ 0.36
UBL3O95164 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL3O95164 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL3O95164 ESRRAP1-201ENST00000400596 1257 ntBASIC17.33■□□□□ 0.36
UBL3O95164 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.33■□□□□ 0.36
UBL3O95164 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBL3O95164 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.33■□□□□ 0.36
UBL3O95164 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.33■□□□□ 0.36
UBL3O95164 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBL3O95164 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.33■□□□□ 0.36
UBL3O95164 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL3O95164 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.33■□□□□ 0.36
UBL3O95164 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL3O95164 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.33■□□□□ 0.36
UBL3O95164 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.33■□□□□ 0.36
UBL3O95164 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL3O95164 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL3O95164 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL3O95164 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.32■□□□□ 0.36
UBL3O95164 AP001271.2-201ENST00000624018 1556 ntBASIC17.32■□□□□ 0.36
UBL3O95164 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.32■□□□□ 0.36
UBL3O95164 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.32■□□□□ 0.36
UBL3O95164 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
UBL3O95164 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL3O95164 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBL3O95164 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL3O95164 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBL3O95164 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.32■□□□□ 0.36
UBL3O95164 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.32■□□□□ 0.36
UBL3O95164 AC008403.3-201ENST00000598924 454 ntBASIC17.32■□□□□ 0.36
UBL3O95164 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
UBL3O95164 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
UBL3O95164 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.32■□□□□ 0.36
UBL3O95164 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBL3O95164 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.32■□□□□ 0.36
UBL3O95164 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UBL3O95164 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL3O95164 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.32■□□□□ 0.36
UBL3O95164 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.32■□□□□ 0.36
UBL3O95164 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.32■□□□□ 0.36
UBL3O95164 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.32■□□□□ 0.36
UBL3O95164 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL3O95164 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL3O95164 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBL3O95164 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.32■□□□□ 0.36
UBL3O95164 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.32■□□□□ 0.36
UBL3O95164 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
UBL3O95164 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.31■□□□□ 0.36
UBL3O95164 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL3O95164 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL3O95164 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL3O95164 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.31■□□□□ 0.36
UBL3O95164 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBL3O95164 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.31■□□□□ 0.36
UBL3O95164 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBL3O95164 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
UBL3O95164 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBL3O95164 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL3O95164 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBL3O95164 POU5F1P3-201ENST00000428824 1078 ntBASIC17.31■□□□□ 0.36
UBL3O95164 FAM201B-201ENST00000458407 597 ntBASIC17.31■□□□□ 0.36
UBL3O95164 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.31■□□□□ 0.36
UBL3O95164 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBL3O95164 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL3O95164 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.31■□□□□ 0.36
UBL3O95164 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.31■□□□□ 0.36
UBL3O95164 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UBL3O95164 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBL3O95164 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBL3O95164 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBL3O95164 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBL3O95164 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
UBL3O95164 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.31■□□□□ 0.36
UBL3O95164 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.31■□□□□ 0.36
UBL3O95164 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBL3O95164 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms