Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.56■□□□□ 0.24
SSX5O60225 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSX5O60225 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSX5O60225 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSX5O60225 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.55■□□□□ 0.24
SSX5O60225 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 HTR7P1-202ENST00000624664 4411 ntBASIC16.55■□□□□ 0.24
SSX5O60225 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SSX5O60225 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 MCRIP2P1-201ENST00000394346 511 ntBASIC16.55■□□□□ 0.24
SSX5O60225 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.55■□□□□ 0.24
SSX5O60225 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.55■□□□□ 0.24
SSX5O60225 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.55■□□□□ 0.24
SSX5O60225 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.55■□□□□ 0.24
SSX5O60225 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.55■□□□□ 0.24
SSX5O60225 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX5O60225 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SSX5O60225 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
SSX5O60225 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.55■□□□□ 0.24
SSX5O60225 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.55■□□□□ 0.24
SSX5O60225 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.54■□□□□ 0.24
SSX5O60225 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.54■□□□□ 0.24
SSX5O60225 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SSX5O60225 HLA-G-202ENST00000376815 851 ntBASIC16.54■□□□□ 0.24
SSX5O60225 HLA-G-203ENST00000376818 1127 ntBASIC16.54■□□□□ 0.24
SSX5O60225 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.54■□□□□ 0.24
SSX5O60225 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.54■□□□□ 0.24
SSX5O60225 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.54■□□□□ 0.24
SSX5O60225 AC105020.6-201ENST00000621523 1217 ntBASIC16.54■□□□□ 0.24
SSX5O60225 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SSX5O60225 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SSX5O60225 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SSX5O60225 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX5O60225 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.54■□□□□ 0.24
SSX5O60225 AC006333.2-201ENST00000607957 2099 ntBASIC16.54■□□□□ 0.24
SSX5O60225 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SSX5O60225 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.53■□□□□ 0.24
SSX5O60225 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.53■□□□□ 0.24
SSX5O60225 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 AC007322.4-201ENST00000509611 723 ntBASIC16.53■□□□□ 0.24
SSX5O60225 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.53■□□□□ 0.24
SSX5O60225 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 AC104581.1-202ENST00000635932 2618 ntBASIC16.53■□□□□ 0.24
SSX5O60225 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.53■□□□□ 0.24
SSX5O60225 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SSX5O60225 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SSX5O60225 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SSX5O60225 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX5O60225 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.52■□□□□ 0.24
SSX5O60225 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SSX5O60225 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SSX5O60225 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.52■□□□□ 0.24
SSX5O60225 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.52■□□□□ 0.24
SSX5O60225 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSX5O60225 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSX5O60225 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SSX5O60225 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSX5O60225 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SSX5O60225 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SSX5O60225 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms