Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.61■□□□□ 0.57
PRICKLE3O43900 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRICKLE3O43900 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.61■□□□□ 0.57
PRICKLE3O43900 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.61■□□□□ 0.57
PRICKLE3O43900 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRICKLE3O43900 MIR4785-201ENST00000585005 73 ntBASIC18.61■□□□□ 0.57
PRICKLE3O43900 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
PRICKLE3O43900 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.61■□□□□ 0.57
PRICKLE3O43900 REXO1L10P-201ENST00000615707 1290 ntBASIC18.61■□□□□ 0.57
PRICKLE3O43900 REXO1L12P-201ENST00000622156 912 ntBASIC18.61■□□□□ 0.57
PRICKLE3O43900 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRICKLE3O43900 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
PRICKLE3O43900 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRICKLE3O43900 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRICKLE3O43900 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRICKLE3O43900 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRICKLE3O43900 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 KRT17P2-201ENST00000300992 1314 ntBASIC18.6■□□□□ 0.57
PRICKLE3O43900 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRICKLE3O43900 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRICKLE3O43900 AL355355.2-201ENST00000442321 338 ntBASIC18.6■□□□□ 0.57
PRICKLE3O43900 AC008040.2-201ENST00000461049 708 ntBASIC18.6■□□□□ 0.57
PRICKLE3O43900 B3GAT3P1-201ENST00000471720 806 ntBASIC18.6■□□□□ 0.57
PRICKLE3O43900 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 AP003071.4-201ENST00000562276 1284 ntBASIC18.6■□□□□ 0.57
PRICKLE3O43900 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 AC130371.2-201ENST00000619443 611 ntBASIC18.6■□□□□ 0.57
PRICKLE3O43900 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRICKLE3O43900 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRICKLE3O43900 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.6■□□□□ 0.57
PRICKLE3O43900 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRICKLE3O43900 RCC2P6-201ENST00000526625 1557 ntBASIC18.59■□□□□ 0.57
PRICKLE3O43900 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 SDHAP1-207ENST00000440850 2000 ntBASIC18.59■□□□□ 0.57
PRICKLE3O43900 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRICKLE3O43900 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRICKLE3O43900 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRICKLE3O43900 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRICKLE3O43900 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRICKLE3O43900 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRICKLE3O43900 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRICKLE3O43900 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRICKLE3O43900 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRICKLE3O43900 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRICKLE3O43900 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 MIR6786-201ENST00000616843 113 ntBASIC18.59■□□□□ 0.57
PRICKLE3O43900 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PRICKLE3O43900 FSCN1P1-201ENST00000568912 1481 ntBASIC18.58■□□□□ 0.57
PRICKLE3O43900 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRICKLE3O43900 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
PRICKLE3O43900 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRICKLE3O43900 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PRICKLE3O43900 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PRICKLE3O43900 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
PRICKLE3O43900 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRICKLE3O43900 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.58■□□□□ 0.57
PRICKLE3O43900 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.58■□□□□ 0.57
PRICKLE3O43900 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRICKLE3O43900 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PRICKLE3O43900 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRICKLE3O43900 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRICKLE3O43900 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.58■□□□□ 0.56
PRICKLE3O43900 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.58■□□□□ 0.56
PRICKLE3O43900 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRICKLE3O43900 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.58■□□□□ 0.56
PRICKLE3O43900 TSPY15P-201ENST00000457163 923 ntBASIC18.58■□□□□ 0.56
PRICKLE3O43900 AC091390.4-202ENST00000476426 537 ntBASIC18.58■□□□□ 0.56
PRICKLE3O43900 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.58■□□□□ 0.56
PRICKLE3O43900 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.58■□□□□ 0.56
PRICKLE3O43900 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRICKLE3O43900 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRICKLE3O43900 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.58■□□□□ 0.56
PRICKLE3O43900 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRICKLE3O43900 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRICKLE3O43900 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRICKLE3O43900 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRICKLE3O43900 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
PRICKLE3O43900 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.58■□□□□ 0.56
PRICKLE3O43900 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRICKLE3O43900 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms