Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP2A1O14983 GUK1-204ENST00000366721 689 ntTSL 3 BASIC22.16■■□□□ 1.14
ATP2A1O14983 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.16■■□□□ 1.14
ATP2A1O14983 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
ATP2A1O14983 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
ATP2A1O14983 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.16■■□□□ 1.14
ATP2A1O14983 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.16■■□□□ 1.14
ATP2A1O14983 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP2A1O14983 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
ATP2A1O14983 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP2A1O14983 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.16■■□□□ 1.14
ATP2A1O14983 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP2A1O14983 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.16■■□□□ 1.14
ATP2A1O14983 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP2A1O14983 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.15■■□□□ 1.14
ATP2A1O14983 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.15■■□□□ 1.14
ATP2A1O14983 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.15■■□□□ 1.14
ATP2A1O14983 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.15■■□□□ 1.14
ATP2A1O14983 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
ATP2A1O14983 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 FAM8A6P-201ENST00000407496 1135 ntBASIC22.15■■□□□ 1.14
ATP2A1O14983 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.15■■□□□ 1.14
ATP2A1O14983 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
ATP2A1O14983 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.15■■□□□ 1.14
ATP2A1O14983 AC022616.7-201ENST00000525383 220 ntBASIC22.15■■□□□ 1.14
ATP2A1O14983 AL512604.3-201ENST00000569583 964 ntBASIC22.15■■□□□ 1.14
ATP2A1O14983 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.15■■□□□ 1.14
ATP2A1O14983 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.15■■□□□ 1.14
ATP2A1O14983 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
ATP2A1O14983 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.15■■□□□ 1.14
ATP2A1O14983 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP2A1O14983 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
ATP2A1O14983 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
ATP2A1O14983 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.14■■□□□ 1.14
ATP2A1O14983 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ATP2A1O14983 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ATP2A1O14983 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
ATP2A1O14983 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
ATP2A1O14983 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
ATP2A1O14983 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ATP2A1O14983 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ATP2A1O14983 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.14■■□□□ 1.13
ATP2A1O14983 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ATP2A1O14983 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ATP2A1O14983 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.14■■□□□ 1.13
ATP2A1O14983 PRSS44-201ENST00000515154 1146 ntBASIC22.14■■□□□ 1.13
ATP2A1O14983 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.14■■□□□ 1.13
ATP2A1O14983 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.14■■□□□ 1.13
ATP2A1O14983 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.14■■□□□ 1.13
ATP2A1O14983 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
ATP2A1O14983 AC141257.4-201ENST00000634557 245 ntBASIC22.14■■□□□ 1.13
ATP2A1O14983 AC136944.6-201ENST00000634818 245 ntBASIC22.14■■□□□ 1.13
ATP2A1O14983 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
ATP2A1O14983 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
ATP2A1O14983 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.14■■□□□ 1.13
ATP2A1O14983 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ATP2A1O14983 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.14■■□□□ 1.13
ATP2A1O14983 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
ATP2A1O14983 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP2A1O14983 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP2A1O14983 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.13■■□□□ 1.13
ATP2A1O14983 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ATP2A1O14983 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
ATP2A1O14983 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ATP2A1O14983 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.13■■□□□ 1.13
ATP2A1O14983 RNF152P1-201ENST00000397754 604 ntBASIC22.13■■□□□ 1.13
ATP2A1O14983 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.13■■□□□ 1.13
ATP2A1O14983 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.13■■□□□ 1.13
ATP2A1O14983 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.13■■□□□ 1.13
ATP2A1O14983 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.13■■□□□ 1.13
ATP2A1O14983 LINC01238-205ENST00000567549 1107 ntBASIC22.13■■□□□ 1.13
ATP2A1O14983 AC139887.4-201ENST00000607877 719 ntBASIC22.13■■□□□ 1.13
ATP2A1O14983 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.13■■□□□ 1.13
ATP2A1O14983 MYC-208ENST00000641036 567 ntBASIC22.13■■□□□ 1.13
ATP2A1O14983 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP2A1O14983 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ATP2A1O14983 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP2A1O14983 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP2A1O14983 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ATP2A1O14983 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ATP2A1O14983 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.13■■□□□ 1.13
ATP2A1O14983 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP2A1O14983 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP2A1O14983 AC099778.1-201ENST00000568593 1911 ntBASIC22.12■■□□□ 1.13
ATP2A1O14983 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP2A1O14983 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
ATP2A1O14983 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.12■■□□□ 1.13
ATP2A1O14983 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP2A1O14983 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms