Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC024243.1-201ENST00000609234 778 ntBASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 AKR1C7P-201ENST00000305623 895 ntBASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 KRT8P11-201ENST00000409686 1436 ntBASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM88BA6NKF7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 AC005104.2-201ENST00000427818 678 ntBASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 HLA-F-220ENST00000434407 884 ntBASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 AL139424.1-201ENST00000607572 797 ntBASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.55■■□□□ 1.2
TMEM88BA6NKF7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 MIR662-201ENST00000384847 95 ntBASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 AC074051.2-201ENST00000565115 352 ntBASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 AL773604.1-201ENST00000617417 272 ntBASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 AC079602.3-201ENST00000623931 403 ntBASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TMEM88BA6NKF7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 SAPCD2P3-201ENST00000455031 850 ntBASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 MOK-208ENST00000519058 917 ntTSL 2 BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 AC106730.1-201ENST00000566722 1090 ntBASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 TERC-201ENST00000602385 541 ntBASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM88BA6NKF7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms