Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 IL9RP2-201ENST00000423948 1312 ntBASIC20.24■□□□□ 0.83
XIRP2A4UGR9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 NUS1P1-201ENST00000446295 882 ntBASIC20.24■□□□□ 0.83
XIRP2A4UGR9 AC079776.4-201ENST00000511039 504 ntBASIC20.24■□□□□ 0.83
XIRP2A4UGR9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.24■□□□□ 0.83
XIRP2A4UGR9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 TSSC2-201ENST00000450217 709 ntBASIC20.23■□□□□ 0.83
XIRP2A4UGR9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
XIRP2A4UGR9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 DPP3P2-201ENST00000416030 1696 ntBASIC20.22■□□□□ 0.83
XIRP2A4UGR9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 SLC25A1P1-201ENST00000528351 927 ntBASIC20.22■□□□□ 0.83
XIRP2A4UGR9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 AL162741.1-201ENST00000565563 1558 ntBASIC20.22■□□□□ 0.83
XIRP2A4UGR9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.22■□□□□ 0.83
XIRP2A4UGR9 TUBB8P6-201ENST00000436895 1288 ntBASIC20.21■□□□□ 0.83
XIRP2A4UGR9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 TMEM179-206ENST00000616017 1645 ntBASIC20.21■□□□□ 0.83
XIRP2A4UGR9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 AC022898.2-201ENST00000616822 1312 ntBASIC20.21■□□□□ 0.83
XIRP2A4UGR9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 BX276092.5-203ENST00000456199 560 ntBASIC20.21■□□□□ 0.83
XIRP2A4UGR9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
XIRP2A4UGR9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
XIRP2A4UGR9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
XIRP2A4UGR9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
XIRP2A4UGR9 KRT8P8-201ENST00000434750 1448 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms