Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AL160286.2-201ENST00000567150 934 ntBASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 ITM2C-210ENST00000620962 501 ntBASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 KRT8P41-201ENST00000533985 1514 ntBASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 IRX1P1-201ENST00000438849 1838 ntBASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 RPPH1-201ENST00000516869 333 ntBASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV5S1A1TA0A578 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
TCRBV5S1A1TA0A578 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
TCRBV5S1A1TA0A578 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 Z85996.1-201ENST00000494644 937 ntBASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 C1QBPP2-201ENST00000528754 825 ntBASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV5S1A1TA0A578 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 AL353708.3-201ENST00000610272 989 ntBASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 AL445675.2-201ENST00000620291 557 ntBASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 AL359736.2-201ENST00000621992 437 ntBASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV5S1A1TA0A578 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 PRORSD1P-201ENST00000295112 541 ntBASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms