Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC141586.3-201ENST00000562166 1838 ntBASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC004264.1-201ENST00000608354 794 ntBASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC104417.2-201ENST00000562989 1793 ntBASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRBV6-4A0A1B0GX49 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 AP000974.1-201ENST00000623909 2387 ntBASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 AP003097.1-201ENST00000530657 1135 ntBASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-4A0A1B0GX49 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms