Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 AL645929.1-201ENST00000420084 975 ntBASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 AC034232.1-201ENST00000506026 1064 ntBASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 LINC01465-201ENST00000408887 1940 ntBASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 SMG8-203ENST00000578922 2178 ntBASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 FAAHP1-202ENST00000446499 1238 ntBASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 AC092329.2-201ENST00000598402 547 ntBASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC163A0A0D9SF12 AC079834.2-201ENST00000609776 1949 ntBASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 TSPY21P-201ENST00000433481 731 ntBASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 TSPY23P-201ENST00000440136 739 ntBASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 FDX1P1-201ENST00000449115 551 ntBASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 PRELID1P1-202ENST00000567272 903 ntBASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 AC111152.3-201ENST00000569699 673 ntBASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 RN7SL510P-201ENST00000581311 263 ntBASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 AC012676.1-201ENST00000574705 1949 ntBASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 FEM1AP1-201ENST00000431297 1995 ntBASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC163A0A0D9SF12 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC163A0A0D9SF12 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC163A0A0D9SF12 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC163A0A0D9SF12 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 AC004870.1-201ENST00000315132 882 ntBASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 AC092119.3-201ENST00000612618 583 ntBASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC163A0A0D9SF12 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 KRT17P6-201ENST00000453795 1220 ntBASIC19.13■□□□□ 0.65
CCDC163A0A0D9SF12 RASA4DP-201ENST00000460726 1199 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms