Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 AP003041.3-201ENST00000527151 707 ntBASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 AC011558.1-201ENST00000623459 338 ntBASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 MYC-208ENST00000641036 567 ntBASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV17A0A0B4J275 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV17A0A0B4J275 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV17A0A0B4J275 AC007375.3-201ENST00000600936 2314 ntBASIC17.52■□□□□ 0.39
TRAV17A0A0B4J275 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 AL162377.1-201ENST00000618844 1793 ntBASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 AP000523.1-201ENST00000398242 1049 ntBASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV17A0A0B4J275 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 GABARAPL3-202ENST00000624044 1851 ntBASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 AL358472.4-201ENST00000633140 710 ntBASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV17A0A0B4J275 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 KRT8P11-201ENST00000409686 1436 ntBASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 AL031133.1-201ENST00000406807 723 ntBASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 UPK3BP1-201ENST00000428678 509 ntBASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms