Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 SNORA17.1-201ENST00000362945 126 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RNA5SP223-201ENST00000365174 120 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RNU1-74P-201ENST00000384108 171 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 SNORA51.8-201ENST00000384234 132 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 MIR141-201ENST00000384975 95 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 MIR506-201ENST00000384998 124 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 FABP12P1-201ENST00000401911 322 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 PIGPP2-201ENST00000411569 458 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC211486.3-201ENST00000412694 621 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AL136133.1-201ENST00000413694 376 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 COX5BP7-201ENST00000414780 274 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RPL6P29-201ENST00000414863 865 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RPL23AP39-201ENST00000415533 405 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC092634.6-201ENST00000418558 192 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 LINC00993-201ENST00000420453 540 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AL360081.1-201ENST00000428299 555 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 IFNNP1-201ENST00000429219 553 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RPL37P1-201ENST00000432310 284 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 NPM1P33-201ENST00000438918 872 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RPL5P25-201ENST00000441148 775 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 MTND1P30-201ENST00000441241 901 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 CEACAMP9-201ENST00000442990 513 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RPL23AP15-201ENST00000450202 459 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 BX842559.2-201ENST00000451418 605 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 PRPF38AP1-201ENST00000451976 933 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 snoU13.20-201ENST00000459180 104 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 SETP11-201ENST00000473027 690 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC006463.2-201ENST00000473326 348 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 HMGB1P28-201ENST00000507778 552 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 OR51K1P-201ENST00000510214 950 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RNA5SP373-201ENST00000517271 95 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC012400.1-201ENST00000518452 381 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RPL12P22-201ENST00000519073 490 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 HIGD1AP10-201ENST00000527837 282 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 MIR4330-201ENST00000579077 105 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 PRPF19P1-201ENST00000584766 898 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 uc_338.18-201ENST00000615451 175 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC090527.3-201ENST00000619041 548 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AC099063.3-201ENST00000642066 185 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 AL031595.2-201ENST00000624215 19071 ntBASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 AL445437.1-201ENST00000623157 3087 ntBASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 RN7SKP104-201ENST00000362605 328 ntBASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 RNU6-251P-201ENST00000363235 104 ntBASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 RNU6-216P-201ENST00000363282 104 ntBASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 RNA5SP187-201ENST00000384400 119 ntBASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 ATP5F1P4-201ENST00000397288 746 ntBASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 USP9YP33-201ENST00000412220 421 ntBASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 NPM1P11-201ENST00000417106 855 ntBASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHB1Q9Y5F3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms