Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
YIPF1Q9Y548 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
YIPF1Q9Y548 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
YIPF1Q9Y548 MAPK10-303ENST00000641324 3959 ntBASIC4.51□□□□□ -1.69
YIPF1Q9Y548 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
YIPF1Q9Y548 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
YIPF1Q9Y548 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AL133243.3-201ENST00000617415 3004 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 ENSAP3-201ENST00000312710 333 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 RNA5SP388-201ENST00000362584 119 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 RNU4-44P-201ENST00000363050 141 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 RNU1-44P-201ENST00000384453 163 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 PPIAP31-201ENST00000405422 495 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 RN7SKP182-201ENST00000410772 298 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 OR8G2P-201ENST00000412796 908 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AL356095.1-201ENST00000417217 199 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC122718.1-201ENST00000439448 744 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC092170.1-201ENST00000440211 356 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 FAM133DP-201ENST00000464802 691 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 RPL7P22-201ENST00000466005 733 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC026414.1-201ENST00000504046 698 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC093752.1-206ENST00000511823 336 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC099522.1-202ENST00000514718 367 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC006518.2-201ENST00000542513 940 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 OR8R1P-201ENST00000543943 764 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 POLR2KP1-201ENST00000553226 168 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 ATP5F1P7-201ENST00000567330 760 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC027455.1-201ENST00000574104 594 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 DPRXP4-201ENST00000578053 568 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 RPL7P50-201ENST00000600588 727 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC125494.3-201ENST00000602759 455 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC063944.3-201ENST00000609969 533 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 MIR6867-201ENST00000610636 67 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AL161637.1-201ENST00000622380 412 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AP002967.1-201ENST00000624203 539 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AP001642.1-201ENST00000624727 2117 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 AC139713.2-210ENST00000641741 992 ntBASIC4.5□□□□□ -1.69
YIPF1Q9Y548 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
YIPF1Q9Y548 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 SEC63P2-201ENST00000503863 1939 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 RNA5SP130-201ENST00000364431 114 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 DNAJC19P6-201ENST00000401853 280 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 ZNF602P-201ENST00000405929 924 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 RNU6-628P-201ENST00000410675 107 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 OR6C64P-201ENST00000419708 825 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 USP9YP21-201ENST00000420603 432 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 EIF1P3-201ENST00000423841 334 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 YWHAEP5-201ENST00000431545 765 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 SEPT14P24-201ENST00000447236 180 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 RPL7L1P1-201ENST00000448259 785 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 AC022431.1-201ENST00000450941 438 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 OFD1P3Y-201ENST00000453312 783 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 AC112206.1-201ENST00000468416 477 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 AL132838.2-201ENST00000492041 314 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 RNA5SP73-201ENST00000516744 108 ntBASIC4.49□□□□□ -1.69
YIPF1Q9Y548 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.49□□□□□ -1.69
YIPF1Q9Y548 AP002812.4-201ENST00000532139 286 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms