Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC012020.1-201ENST00000624541 1728 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AC018529.3-201ENST00000624212 2254 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 RPL21P17-201ENST00000397467 475 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 JKAMPP1-201ENST00000413804 919 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 RPS29P4-201ENST00000414733 161 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 TCEA1P2-201ENST00000420496 906 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AL034379.1-201ENST00000423216 253 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 Z74696.2-201ENST00000436514 498 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 RPS17P13-201ENST00000448974 407 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 RN7SL293P-201ENST00000481765 281 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 RPL7P24-201ENST00000493052 752 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 RPL5P23-201ENST00000496040 868 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AL513477.2-201ENST00000607858 568 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 CR382285.2-201ENST00000624662 1495 ntBASIC5.35□□□□□ -1.55
NINLQ9Y2I6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NINLQ9Y2I6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 AL591419.1-201ENST00000427423 339 ntBASIC5.34□□□□□ -1.55
NINLQ9Y2I6 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 AC006994.1-201ENST00000438212 839 ntBASIC5.34□□□□□ -1.55
NINLQ9Y2I6 TPTE2P3-201ENST00000441562 1189 ntBASIC5.34□□□□□ -1.55
NINLQ9Y2I6 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 RPS26P15-201ENST00000488067 348 ntBASIC5.34□□□□□ -1.55
NINLQ9Y2I6 RPL31P61-201ENST00000496160 376 ntBASIC5.34□□□□□ -1.55
NINLQ9Y2I6 RN7SKP57-201ENST00000517248 293 ntBASIC5.34□□□□□ -1.55
NINLQ9Y2I6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 AL161912.3-201ENST00000605404 628 ntBASIC5.34□□□□□ -1.55
NINLQ9Y2I6 AC026368.1-201ENST00000614934 690 ntBASIC5.34□□□□□ -1.55
NINLQ9Y2I6 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NINLQ9Y2I6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.34□□□□□ -1.56
NINLQ9Y2I6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 MIR30B-201ENST00000384850 88 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 AC007066.1-201ENST00000392902 381 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 SNORA3.3-201ENST00000408712 125 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 RPL7P4-203ENST00000430239 730 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 AC011742.1-201ENST00000431448 434 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 CCDC75P1-201ENST00000469247 791 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 CDH12P2-201ENST00000504393 298 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 RNU6-943P-201ENST00000516960 98 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 GNRHR2P1-201ENST00000555315 631 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 MIR5187-201ENST00000583479 76 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 AL137843.1-201ENST00000605078 385 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 AC012603.1-201ENST00000606424 528 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 AP003072.5-201ENST00000623872 773 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 AC026523.2-201ENST00000625039 7739 ntBASIC5.33□□□□□ -1.56
NINLQ9Y2I6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NINLQ9Y2I6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NINLQ9Y2I6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.32□□□□□ -1.56
NINLQ9Y2I6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NINLQ9Y2I6 MIR708-201ENST00000390708 88 ntBASIC5.32□□□□□ -1.56
NINLQ9Y2I6 SNORA48.2-201ENST00000390926 124 ntBASIC5.32□□□□□ -1.56
NINLQ9Y2I6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms