Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC105137.1-201ENST00000484355 562 ntBASIC4.01□□□□□ -1.77
RNF6Q9Y252 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 AC025554.1-201ENST00000505641 188 ntBASIC4.01□□□□□ -1.77
RNF6Q9Y252 AC017037.1-201ENST00000508460 471 ntBASIC4.01□□□□□ -1.77
RNF6Q9Y252 MIR2116-201ENST00000517221 80 ntBASIC4.01□□□□□ -1.77
RNF6Q9Y252 AC090281.1-201ENST00000523019 276 ntBASIC4.01□□□□□ -1.77
RNF6Q9Y252 OR8K2P-201ENST00000524645 927 ntBASIC4.01□□□□□ -1.77
RNF6Q9Y252 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNF6Q9Y252 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 OR4U1P-201ENST00000554958 912 ntBASIC4.01□□□□□ -1.77
RNF6Q9Y252 AC084757.1-201ENST00000559987 490 ntBASIC4.01□□□□□ -1.77
RNF6Q9Y252 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 MIR4512-201ENST00000583257 77 ntBASIC4.01□□□□□ -1.77
RNF6Q9Y252 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 AL162574.2-201ENST00000614618 657 ntBASIC4.01□□□□□ -1.77
RNF6Q9Y252 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF6Q9Y252 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF6Q9Y252 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNF6Q9Y252 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4□□□□□ -1.77
RNF6Q9Y252 NOL8P1-201ENST00000508336 3529 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AL118496.1-201ENST00000440201 1812 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF6Q9Y252 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF6Q9Y252 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF6Q9Y252 AL049555.1-201ENST00000562834 1933 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
RNF6Q9Y252 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF6Q9Y252 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4□□□□□ -1.77
RNF6Q9Y252 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4□□□□□ -1.77
RNF6Q9Y252 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4□□□□□ -1.77
RNF6Q9Y252 RPS20P14-201ENST00000412545 360 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AC092647.1-201ENST00000420654 287 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AC023128.2-201ENST00000420880 1223 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF6Q9Y252 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4□□□□□ -1.77
RNF6Q9Y252 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4□□□□□ -1.77
RNF6Q9Y252 AL590762.3-201ENST00000436372 640 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AC122718.1-201ENST00000439448 744 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 ARL5AP2-201ENST00000444698 533 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 CDC27P1-201ENST00000445384 715 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4□□□□□ -1.77
RNF6Q9Y252 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4□□□□□ -1.77
RNF6Q9Y252 AL133477.1-201ENST00000457472 514 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4□□□□□ -1.77
RNF6Q9Y252 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4□□□□□ -1.77
RNF6Q9Y252 FAM133DP-201ENST00000464802 691 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 UQCRHP4-201ENST00000471686 272 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4□□□□□ -1.77
RNF6Q9Y252 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF6Q9Y252 AC023050.1-201ENST00000498198 304 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4□□□□□ -1.77
RNF6Q9Y252 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4□□□□□ -1.77
RNF6Q9Y252 RNU6-1102P-201ENST00000516149 96 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4□□□□□ -1.77
RNF6Q9Y252 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4□□□□□ -1.77
RNF6Q9Y252 OR5AK3P-201ENST00000527486 1297 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4□□□□□ -1.77
RNF6Q9Y252 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4□□□□□ -1.77
RNF6Q9Y252 EIF4A2P1-201ENST00000587313 1063 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4□□□□□ -1.77
RNF6Q9Y252 AL671309.1-201ENST00000603750 544 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AC026368.1-201ENST00000614934 690 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AL161637.1-201ENST00000622380 412 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 AC006065.6-201ENST00000625201 545 ntBASIC4□□□□□ -1.77
RNF6Q9Y252 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
RNF6Q9Y252 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4□□□□□ -1.77
RNF6Q9Y252 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4□□□□□ -1.77
RNF6Q9Y252 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
RNF6Q9Y252 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RNF6Q9Y252 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF6Q9Y252 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC092162.3-201ENST00000624511 1624 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF6Q9Y252 METTL21EP-201ENST00000298105 713 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 RNU1-130P-201ENST00000363930 160 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF6Q9Y252 SNORA37-201ENST00000384504 129 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 SNORD66.1-201ENST00000391230 76 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 ZNF603P-201ENST00000405613 487 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 ATF1P1-201ENST00000406040 927 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 HMGB3P18-201ENST00000406327 590 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 MTATP6P31-201ENST00000406985 692 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 SNRPFP1-201ENST00000414761 252 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AL121882.1-201ENST00000422893 417 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF6Q9Y252 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 RPL23AP43-201ENST00000446445 471 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 HMGB3P22-202ENST00000451823 572 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms