Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 AL121612.2-201ENST00000612261 482 ntBASIC5.66□□□□□ -1.5
MBD1Q9UIS9 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 AC136475.10-201ENST00000620253 385 ntBASIC5.66□□□□□ -1.5
MBD1Q9UIS9 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
MBD1Q9UIS9 AC003985.2-201ENST00000562268 1669 ntBASIC5.66□□□□□ -1.5
MBD1Q9UIS9 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC117529.2-201ENST00000512159 2068 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC093849.1-201ENST00000563631 2209 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 OR52B5P-201ENST00000435337 951 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 RPL7AP6-201ENST00000477943 801 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 HMGN1P13-201ENST00000505795 138 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 MTCO2P4-201ENST00000517968 247 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AL121594.2-201ENST00000541658 472 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 OR6C73P-201ENST00000546432 358 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC126177.5-201ENST00000549599 178 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AL157687.1-201ENST00000554853 619 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 MIR4420-201ENST00000583944 77 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC103710.1-201ENST00000610003 901 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AL359535.1-201ENST00000612100 1087 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC090607.5-201ENST00000615692 224 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AL118522.2-201ENST00000616045 615 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC068870.2-201ENST00000620635 389 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC073348.1-201ENST00000623002 331 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC090574.1-201ENST00000623186 233 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 AC015871.5-202ENST00000623252 701 ntBASIC5.65□□□□□ -1.5
MBD1Q9UIS9 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
MBD1Q9UIS9 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
MBD1Q9UIS9 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.65□□□□□ -1.51
MBD1Q9UIS9 AC245100.2-201ENST00000454544 1679 ntBASIC5.65□□□□□ -1.51
MBD1Q9UIS9 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.65□□□□□ -1.51
MBD1Q9UIS9 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
MBD1Q9UIS9 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
MBD1Q9UIS9 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
MBD1Q9UIS9 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
MBD1Q9UIS9 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
MBD1Q9UIS9 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
MBD1Q9UIS9 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
MBD1Q9UIS9 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
MBD1Q9UIS9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
MBD1Q9UIS9 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
MBD1Q9UIS9 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.64□□□□□ -1.51
MBD1Q9UIS9 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MBD1Q9UIS9 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
MBD1Q9UIS9 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MBD1Q9UIS9 MTND5P23-201ENST00000430812 1655 ntBASIC5.64□□□□□ -1.51
MBD1Q9UIS9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
MBD1Q9UIS9 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MBD1Q9UIS9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MBD1Q9UIS9 U8.4-201ENST00000363626 134 ntBASIC5.64□□□□□ -1.51
MBD1Q9UIS9 RNU5E-5P-201ENST00000365379 116 ntBASIC5.64□□□□□ -1.51
MBD1Q9UIS9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
MBD1Q9UIS9 RN7SKP213-201ENST00000410746 298 ntBASIC5.64□□□□□ -1.51
MBD1Q9UIS9 RPS6P23-201ENST00000413224 722 ntBASIC5.64□□□□□ -1.51
MBD1Q9UIS9 METTL15P3-201ENST00000415522 1221 ntBASIC5.64□□□□□ -1.51
MBD1Q9UIS9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms