Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC006363.1-201ENST00000603806 463 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 AL356218.2-201ENST00000605264 187 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC131159.1-201ENST00000621854 213 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC007490.1-201ENST00000624321 703 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 CR392039.4-201ENST00000624968 501 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC134882.1-201ENST00000603738 1676 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC120338.1-201ENST00000625074 1541 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 Z99496.1-201ENST00000469424 1477 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 RNU6-249P-201ENST00000363016 102 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 RNU4-25P-201ENST00000410569 230 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 MRPS36P1-201ENST00000421291 307 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC073143.1-201ENST00000436316 395 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 MTND2P22-201ENST00000444325 1033 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC104978.1-201ENST00000449387 391 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 AL133477.1-201ENST00000457472 514 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 NIP7P2-201ENST00000485801 544 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC010486.2-201ENST00000505572 483 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 AP000619.3-201ENST00000535634 1127 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC009852.2-201ENST00000567898 485 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC012409.3-201ENST00000611343 981 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 AC009039.2-201ENST00000624524 529 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 DBF4P1-201ENST00000412976 1892 ntBASIC5.25□□□□□ -1.57
COL20A1Q9P218 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL20A1Q9P218 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
COL20A1Q9P218 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC104623.2-202ENST00000623477 4002 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 CASC19-204ENST00000641001 2055 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL20A1Q9P218 RNU4-40P-201ENST00000364351 143 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 SNORA71.2-201ENST00000364941 134 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 SNORD116-8-201ENST00000384365 95 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 TAF9BP1-201ENST00000396646 746 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 RNU6-272P-201ENST00000411028 104 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC006960.1-201ENST00000419980 153 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 RPL12P34-201ENST00000424532 479 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC092013.1-201ENST00000438795 332 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC092393.1-201ENST00000439625 742 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 RPS27AP15-201ENST00000447672 466 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AL162591.2-201ENST00000449634 317 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 RPL21P126-201ENST00000470049 478 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 RPS3AP22-201ENST00000488297 769 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC105313.1-201ENST00000509121 353 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 RNA5SP249-201ENST00000516127 99 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 MTND2P26-201ENST00000528255 1029 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms