Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RNU2-42P-201ENST00000410697 113 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 GJA6P-201ENST00000415117 1042 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 DNAJC19P4-201ENST00000440115 345 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 COX6CP18-201ENST00000448769 222 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AC022431.1-201ENST00000450941 438 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AL121769.1-201ENST00000469473 401 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AC008033.2-201ENST00000542626 177 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AL390816.3-201ENST00000604527 1066 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 MIR6133-201ENST00000617057 108 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AC009704.2-201ENST00000618739 483 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AL356596.1-201ENST00000624230 379 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AC099654.14-201ENST00000638599 341 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 CR383658.2-201ENST00000547576 1525 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 MTND5P26-201ENST00000426018 1752 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 GTF2H2B-203ENST00000508065 1432 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AC100871.1-201ENST00000507871 1456 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 OR9G4-201ENST00000302957 984 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AL133482.1-201ENST00000415988 498 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 OR8F1P-201ENST00000425243 930 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 RPL31P54-201ENST00000429803 370 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AL035551.1-201ENST00000446931 348 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 PAXBP1P1-201ENST00000449315 447 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 RPL30P9-201ENST00000465586 330 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 RN7SL197P-201ENST00000466981 299 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AC041039.1-201ENST00000485656 536 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 HMGB1P36-201ENST00000487709 576 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 SETP14-201ENST00000497538 873 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AC111193.1-201ENST00000504097 155 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 OR7H2P-201ENST00000513483 306 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AC114781.4-201ENST00000513707 639 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 RNU6-314P-201ENST00000516574 104 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 OR5AN2P-201ENST00000534535 896 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 GTF2IP8-201ENST00000560687 584 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AC009597.2-201ENST00000604659 592 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AC083809.1-201ENST00000615051 472 ntBASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
PDLIM7Q9NR12 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms