Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 Y_RNA.422-201ENST00000384054 114 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 TDGF1P4-201ENST00000401555 520 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC131097.2-201ENST00000404031 595 ntAPPRIS ALT2 TSL 3 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 YWHAZP3-201ENST00000415292 738 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC092042.2-201ENST00000417304 331 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC006457.1-201ENST00000420733 392 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC093106.2-201ENST00000428212 385 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 NEFLP1-201ENST00000436364 984 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 BRK1P2-201ENST00000442875 223 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 GAS5-219ENST00000449289 542 ntTSL 3 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 PPIAP28-201ENST00000458378 485 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 RN7SL643P-201ENST00000471845 291 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC108145.1-201ENST00000503770 153 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC108073.1-201ENST00000508231 674 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 Y_RNA.682-201ENST00000516457 100 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 POLR3GP2-201ENST00000588366 668 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 MIR7156-201ENST00000620979 60 ntBASIC8.5□□□□□ -1.05
RTN4Q9NQC3 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC8.5□□□□□ -1.05
RTN4Q9NQC3 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 Y_RNA.399-201ENST00000383955 105 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 RNU6-817P-201ENST00000391083 104 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AC004386.1-201ENST00000393214 761 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 MTCYBP4-201ENST00000401524 249 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 MIR548K-201ENST00000408406 116 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 RPL37P10-201ENST00000412884 288 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 UQCRHP2-201ENST00000415651 288 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AC127537.1-201ENST00000418183 748 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 RPS4XP5-201ENST00000419038 768 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AL022721.1-201ENST00000436521 505 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AF228730.2-201ENST00000438784 848 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AC104058.1-201ENST00000448028 297 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AC022080.2-201ENST00000452932 533 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AC012181.1-201ENST00000479895 423 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AC107385.1-201ENST00000507985 778 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AL671862.1-201ENST00000515851 349 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AP003174.3-201ENST00000537926 516 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 HMGB3P26-201ENST00000560051 582 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 RPL23AP84-201ENST00000571193 464 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 MIR4437-201ENST00000581331 60 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AC067852.5-201ENST00000589299 310 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AC016629.2-201ENST00000597341 199 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AL031320.1-201ENST00000604177 357 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 CTHRC1P1-201ENST00000605383 469 ntBASIC8.49□□□□□ -1.05
RTN4Q9NQC3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 OFD1P9Y-201ENST00000417699 1491 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms