Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC007342.8-201ENST00000623278 678 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 LINC01808-202ENST00000641680 1116 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 LINC01109-201ENST00000603837 3081 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AL451142.2-201ENST00000429076 2090 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AL592148.3-201ENST00000608771 2646 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 ATP5F1P2-201ENST00000398143 760 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 GLULP6-201ENST00000399502 913 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 RPS3AP23-201ENST00000401762 784 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AP000357.1-201ENST00000409926 1165 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 TAF13P2-201ENST00000416876 286 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 PRELID3BP10-201ENST00000431957 584 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 RPEP2-201ENST00000432149 701 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 PTGES3P1-201ENST00000439531 483 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 ARL5AP2-201ENST00000444698 533 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 ZNF886P-201ENST00000450781 723 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 RNU7-27P-201ENST00000459281 62 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC079804.1-201ENST00000461922 436 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 METTL15P1-201ENST00000481421 1045 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC104687.1-201ENST00000485829 412 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 CDH12P4-201ENST00000517835 295 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 CDH12P3-201ENST00000517935 295 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 CDH12P1-201ENST00000518435 295 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 MTND2P38-201ENST00000522536 667 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 OR5AN2P-201ENST00000534535 896 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AP005119.2-201ENST00000579735 1105 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC048344.4-201ENST00000619744 527 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AP003497.2-201ENST00000624220 967 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC017104.5-201ENST00000637647 639 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC074029.4-201ENST00000624796 1859 ntBASIC4.56□□□□□ -1.68
PCDH9Q9HC56 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PCDH9Q9HC56 AC090017.1-201ENST00000548612 1779 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 RNU4-22P-201ENST00000411058 166 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 TCEA1P4-201ENST00000415066 844 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 MTND2P16-201ENST00000419987 799 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 IPMKP1-201ENST00000425988 855 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AP001324.1-201ENST00000428553 399 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 RPL12P46-201ENST00000436610 195 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC010627.1-201ENST00000503819 1294 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC111193.1-201ENST00000504097 155 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC111000.3-201ENST00000508057 576 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC006499.6-201ENST00000511169 607 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 RN7SKP92-201ENST00000517266 244 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC069240.1-201ENST00000548774 375 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC027104.1-201ENST00000563702 681 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC022884.3-201ENST00000579571 248 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC008782.1-201ENST00000603386 430 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 Z99289.3-201ENST00000605586 594 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms