Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 NMNAT1P2-201ENST00000435192 860 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 GSTA7P-201ENST00000438425 448 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 MTND5P2-201ENST00000442927 1142 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC112498.1-201ENST00000444401 332 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC079776.3-201ENST00000450665 370 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AL445433.1-201ENST00000457507 257 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 RPL7AP52-201ENST00000458096 790 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC112206.1-201ENST00000468416 477 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 TRBV8-2-201ENST00000475637 270 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC104971.1-201ENST00000495117 578 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC093755.1-201ENST00000512950 1023 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 GSTP1P1-201ENST00000548078 319 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 FKBP1BP1-201ENST00000553366 325 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC093249.4-201ENST00000564755 259 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AL121932.1-201ENST00000605542 214 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC007497.1-201ENST00000610421 561 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 VIS1.1-201ENST00000610517 203 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 MIR6780A-201ENST00000615089 68 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC015804.1-201ENST00000622935 435 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 MIR7641-1-201ENST00000627518 61 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 DDX18P4-201ENST00000511690 1966 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 RNU1-83P-201ENST00000363426 164 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 MIR141-201ENST00000384975 95 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 MIR1303-201ENST00000408625 86 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 GAPDHP49-201ENST00000421421 961 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AL009174.1-201ENST00000426577 416 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC093414.1-201ENST00000434712 514 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AL451139.1-201ENST00000434718 346 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 TDGF1P1-201ENST00000445734 527 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 HMGB1P48-201ENST00000446155 598 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC009220.1-201ENST00000451614 275 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 RPS29P33-201ENST00000456717 146 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 GAPDHP39-201ENST00000481866 979 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AL035404.1-201ENST00000497982 568 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC104090.1-201ENST00000506341 1171 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 OR5BM1P-201ENST00000512021 366 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC008837.2-201ENST00000513076 418 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 BTF3P13-201ENST00000513224 490 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 RN7SKP46-201ENST00000515942 234 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 OR4C2P-201ENST00000530855 1064 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 NPM1P47-201ENST00000560843 856 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC091042.1-201ENST00000579213 173 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC022884.3-201ENST00000579571 248 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 MIR3667-201ENST00000581025 74 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC055764.2-201ENST00000610089 670 ntBASIC4.95□□□□□ -1.62
USP29Q9HBJ7 AC012414.7-202ENST00000622705 1090 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms