Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC116337.1-201ENST00000509680 687 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 RPS27AP18-201ENST00000515536 459 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AL096712.1-201ENST00000614561 159 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 SPATA31C2-201ENST00000324915 3777 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 PAPPA-AS1-201ENST00000445861 2450 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 LINC01613-201ENST00000561476 2780 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AL158163.1-201ENST00000603915 1649 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 RNU6-128P-201ENST00000383976 107 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 MIR498-201ENST00000385134 124 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 MIR450B-201ENST00000401182 78 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 RPL12P23-201ENST00000405880 490 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 RN7SKP216-201ENST00000411050 312 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC069218.2-201ENST00000411665 344 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AL358176.3-201ENST00000420757 454 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 RPS3P2-201ENST00000421346 701 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 EEF1GP7-201ENST00000422983 703 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 RPL7P46-201ENST00000425129 740 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC104164.1-201ENST00000460282 590 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 RN7SL629P-201ENST00000489622 285 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC020893.1-201ENST00000502452 580 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 RN7SKP196-201ENST00000516267 345 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 RNU6-1213P-201ENST00000517075 94 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AL021918.2-201ENST00000613415 194 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 U2.1-201ENST00000618978 145 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC092608.2-201ENST00000624427 218 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 NCOA4P3-201ENST00000513203 1877 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC022819.1-201ENST00000563495 3910 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 SLC2A3P1-201ENST00000519666 1451 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AC011755.1-201ENST00000623763 2049 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 RBPJP2-201ENST00000618187 1444 ntBASIC7.1□□□□□ -1.27
PHOX2BQ99453 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.1□□□□□ -1.27
PHOX2BQ99453 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PHOX2BQ99453 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms