Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 RAC1P2-201ENST00000511164 579 ntBASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 AC016590.3-201ENST00000611171 753 ntBASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 AL645927.2-201ENST00000618350 349 ntBASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 AC233309.1-201ENST00000619522 751 ntBASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 AC103858.2-201ENST00000621471 543 ntBASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 AC092809.1-201ENST00000441469 474 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 RPL21P10-201ENST00000463521 490 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 OR5AP1P-201ENST00000529730 940 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 AC023161.2-201ENST00000551218 780 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 SCARNA15.3-201ENST00000626315 122 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 SCARNA4.1-201ENST00000628597 123 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 AC006504.1-201ENST00000562493 3666 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 SNORA3.3-201ENST00000408712 125 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 PRDX3P3-201ENST00000447765 522 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 CYCSP53-201ENST00000455540 265 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 OR1AB1P-201ENST00000585564 761 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 AL139089.1-201ENST00000620372 975 ntBASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHROOM3Q8TF72 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 RNU6-233P-201ENST00000410845 141 ntBASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 HMGB3P20-201ENST00000417997 600 ntBASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 IFNNP1-201ENST00000429219 553 ntBASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 OR6C71P-202ENST00000641886 1107 ntBASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 OR5AC4P-202ENST00000642086 985 ntBASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.84□□□□□ -1.79
SHROOM3Q8TF72 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 CDH12P2-201ENST00000504393 298 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC015813.6-201ENST00000624409 5808 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AL355596.1-201ENST00000565399 3996 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 RNA5SP322-201ENST00000363617 119 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 MIR199A2-201ENST00000385289 110 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC245052.5-201ENST00000416320 649 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 HSPD1P21-201ENST00000436541 245 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AL136126.1-201ENST00000473603 402 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC007688.1-201ENST00000475592 759 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC106707.2-201ENST00000484182 374 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 RPS6P4-201ENST00000494693 758 ntBASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.83□□□□□ -1.8
SHROOM3Q8TF72 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms