Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC107954.1-201ENST00000565906 727 ntBASIC5.45□□□□□ -1.54
NUP43Q8NFH3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 AC245014.2-201ENST00000603689 287 ntBASIC5.45□□□□□ -1.54
NUP43Q8NFH3 AC246785.4-201ENST00000605374 287 ntBASIC5.45□□□□□ -1.54
NUP43Q8NFH3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.45□□□□□ -1.54
NUP43Q8NFH3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 AC006504.8-201ENST00000621046 635 ntBASIC5.45□□□□□ -1.54
NUP43Q8NFH3 YWHAEP7-203ENST00000622054 312 ntBASIC5.45□□□□□ -1.54
NUP43Q8NFH3 AC090574.1-201ENST00000623186 233 ntBASIC5.45□□□□□ -1.54
NUP43Q8NFH3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NUP43Q8NFH3 MFSD8-239ENST00000641590 2479 ntBASIC5.45□□□□□ -1.54
NUP43Q8NFH3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL512646.1-201ENST00000269395 1077 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.86-201ENST00000363020 111 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 RNU1-149P-201ENST00000390870 161 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 RNU6-332P-201ENST00000391193 108 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 MIR1302-11-201ENST00000408051 138 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 MIR1305-201ENST00000408300 86 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 MIR1302-9-201ENST00000408365 138 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 MIR1302-10-201ENST00000408734 138 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 RN7SKP17-201ENST00000411242 351 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL354751.2-201ENST00000415471 210 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 SNRPEP10-201ENST00000420249 274 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 COX6CP17-201ENST00000421389 185 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 OR52B5P-201ENST00000435337 951 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL590399.4-201ENST00000436561 601 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 RPL23AP16-201ENST00000441715 421 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL161722.1-201ENST00000446972 1032 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL672138.1-201ENST00000450604 1015 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 RBMY2TP-201ENST00000451162 947 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC099563.1-201ENST00000456086 418 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC096741.1-201ENST00000472250 846 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL122020.1-201ENST00000472287 459 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 RN7SL193P-201ENST00000491708 276 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC006390.1-201ENST00000508068 283 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC008562.1-201ENST00000521763 330 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 NANOGNBP2-201ENST00000544753 553 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC079905.1-201ENST00000549280 475 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC012507.3-201ENST00000603556 477 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 MIR1302-2-201ENST00000607096 138 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL050343.2-201ENST00000607338 280 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC090948.2-201ENST00000607363 564 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC015982.1-201ENST00000608113 465 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC093788.1-201ENST00000609356 927 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 MIR6793-201ENST00000612376 63 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AL138960.1-201ENST00000613838 513 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC022400.9-201ENST00000623633 273 ntBASIC5.44□□□□□ -1.54
NUP43Q8NFH3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms