Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL663109.1-201ENST00000411498 844 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 MTCO1P21-201ENST00000416634 589 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 CRIP1P1-201ENST00000427567 185 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 CEACAMP1-201ENST00000434624 1035 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 LSM1P1-201ENST00000438629 273 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 USP9YP29-201ENST00000445112 563 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 IGBP1P3-201ENST00000447449 1000 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 RNU7-136P-201ENST00000458819 69 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 RPL35AP28-201ENST00000459730 331 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 PLGLA-201ENST00000465668 449 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AP001922.4-201ENST00000526967 290 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AC069307.1-201ENST00000602820 447 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 MIR6820-201ENST00000611508 62 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AC025594.3-201ENST00000613068 790 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AL445437.1-201ENST00000623157 3087 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 AL450326.2-201ENST00000421913 1962 ntBASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNPOQ8N3V7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AP001284.1-201ENST00000528393 2118 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 RNU5F-6P-201ENST00000362979 116 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 RN7SKP103-201ENST00000363848 320 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 RNU1-106P-201ENST00000384382 164 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AL109941.1-201ENST00000401925 229 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AL133482.1-201ENST00000415988 498 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 PSMD10P3-201ENST00000437000 448 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 ST13P20-201ENST00000447996 1065 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AL035090.1-201ENST00000454835 332 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AL136126.1-201ENST00000473603 402 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 PDCL3P4-201ENST00000489621 720 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC108941.1-201ENST00000502853 530 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 CBX3P3-201ENST00000508108 532 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC104057.1-201ENST00000515547 497 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 SCARNA16.4-201ENST00000516956 187 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC104986.1-201ENST00000517978 436 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC025881.1-201ENST00000518851 512 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 PCNPP1-201ENST00000552501 511 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms