Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 IGKV7-3-201ENST00000357453 298 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 RN7SKP115-201ENST00000363177 317 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 SNORA51.8-201ENST00000384234 132 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 SNORD116-1-201ENST00000384335 95 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 MIR1302-8-201ENST00000408342 128 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 SNORA11C-201ENST00000408532 129 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 RNU6-77P-201ENST00000410554 91 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 RNU4-72P-201ENST00000410754 173 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 RPL7P53-201ENST00000421245 739 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AL627308.1-201ENST00000435693 821 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 ELOCP10-201ENST00000440624 327 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AL357520.1-201ENST00000441557 453 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 HMGB3P9-201ENST00000441799 583 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 MRPL42P4-201ENST00000453267 443 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AL133477.1-201ENST00000457472 514 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC026348.1-201ENST00000462549 1053 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC073522.1-201ENST00000483312 377 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC025164.1-201ENST00000496249 478 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 OR5H4P-201ENST00000510851 923 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 SCARNA21.2-201ENST00000516600 166 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 NPM1P6-201ENST00000521088 871 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC008015.1-201ENST00000555505 465 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 NIFKP8-201ENST00000560500 874 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC018552.3-201ENST00000567416 561 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 MIR3912-201ENST00000577566 105 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 VN1R88P-201ENST00000596787 292 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC133552.5-201ENST00000604266 540 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 ELOCP34-201ENST00000604436 327 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC245008.1-201ENST00000608123 476 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AP000894.4-201ENST00000610185 483 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AL450489.1-201ENST00000612071 468 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC107075.1-201ENST00000613695 314 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC103706.2-201ENST00000638080 240 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC120338.1-201ENST00000625074 1541 ntBASIC4.85□□□□□ -1.63
RFX6Q8HWS3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX6Q8HWS3 AC104260.2-201ENST00000623551 3497 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AC092079.1-201ENST00000558620 1985 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 OR56B2P-201ENST00000317102 954 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 MIR1303-201ENST00000408625 86 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 MORF4L1P6-201ENST00000418771 268 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AL158073.1-201ENST00000426848 1104 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AC007559.1-201ENST00000428736 355 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 MTCO1P3-201ENST00000429327 192 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 H2AFZP5-201ENST00000446960 382 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AL935212.3-201ENST00000450729 284 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AC018638.3-201ENST00000461273 132 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AC063943.1-201ENST00000465434 453 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 RPL7P16-201ENST00000479738 738 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 SCARNA22-201ENST00000503991 125 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 RPF2P2-201ENST00000504693 896 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AC009117.1-201ENST00000563948 554 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 BGLT3-201ENST00000564523 994 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 RN7SL652P-201ENST00000577769 300 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AL358072.1-201ENST00000604156 575 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AC090948.2-201ENST00000607363 564 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 SNORD91B-202ENST00000608459 222 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 AC087385.3-201ENST00000620477 187 ntBASIC4.84□□□□□ -1.63
RFX6Q8HWS3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms