Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MTCYBP19-201ENST00000517463 1124 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AP001922.4-201ENST00000526967 290 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 OR5M2P-201ENST00000529003 936 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 BRD9P1-201ENST00000529855 560 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC022880.1-201ENST00000534017 973 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC087465.1-201ENST00000560574 245 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 UBE2FP2-201ENST00000566646 462 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC002400.1-201ENST00000569310 726 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 MIR3934-201ENST00000579806 107 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 MIR4436B2-201ENST00000581415 91 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 MIR4436B1-201ENST00000583272 91 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AP002884.5-201ENST00000595053 1132 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL590229.1-201ENST00000603497 542 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC107304.1-201ENST00000604229 296 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL021997.1-201ENST00000605757 193 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC011374.2-201ENST00000607135 526 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC103591.3-201ENST00000608684 209 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL158062.1-201ENST00000619632 745 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 MIR6730-201ENST00000622213 67 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL157770.1-201ENST00000623049 439 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 OR5BE1P-202ENST00000641168 1176 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 MAPK10-286ENST00000641208 8747 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 KARSP3-201ENST00000571212 1504 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 RNU6-553P-201ENST00000364047 96 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 SNORA58B-201ENST00000364259 136 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 RNU6-304P-201ENST00000364855 107 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 OR4K6P-201ENST00000416478 897 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 ATG4AP1-201ENST00000416893 538 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 RPA2P2-201ENST00000419698 796 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 RPL21P91-201ENST00000429231 479 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC098826.1-201ENST00000433943 471 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC016831.4-201ENST00000438302 307 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 RPL12P3-201ENST00000440080 396 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 ARAFP2-201ENST00000440565 559 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AL935212.3-201ENST00000450729 284 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 SCARNA10-201ENST00000459255 330 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 BZW1P2-201ENST00000473537 826 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC098799.3-201ENST00000506095 438 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC008565.1-201ENST00000509046 885 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC007016.1-201ENST00000512110 244 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 TCP11X3P-202ENST00000514289 1254 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 C1GALT1P3-201ENST00000522049 819 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 MTCO3P15-201ENST00000526563 574 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC105233.3-201ENST00000531125 744 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC022069.1-201ENST00000582910 658 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC090616.2-202ENST00000584248 222 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC106791.2-201ENST00000604680 391 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC010738.1-201ENST00000604970 987 ntBASIC4.56□□□□□ -1.68
ZNF549Q6P9A3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms