Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 RNU6-88P-201ENST00000606801 100 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 MIR6820-201ENST00000611508 62 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC008443.7-201ENST00000622195 246 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC231657.1-201ENST00000624313 397 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC021755.1-201ENST00000559747 1447 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 Z98755.1-201ENST00000407015 1384 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 OR1L6-202ENST00000373684 1044 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 SNORD56.6-201ENST00000384569 71 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 RPL23AP29-201ENST00000397284 453 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 MORF4L1P6-201ENST00000418771 268 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 RPL30P3-201ENST00000424262 333 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 COX6CP15-201ENST00000426313 211 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC073335.1-201ENST00000427776 363 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 GEMIN8P3-201ENST00000445417 720 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 MTCO3P16-201ENST00000454456 754 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 TRBV26-201ENST00000456572 344 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC114981.1-201ENST00000503897 678 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 DSTNP2-201ENST00000504533 515 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 HMGB3P13-201ENST00000511263 607 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC104057.1-201ENST00000515547 497 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC107918.3-201ENST00000533272 382 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC024940.3-201ENST00000538551 316 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC124068.1-201ENST00000563131 678 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 MTCYBP33-201ENST00000575007 1130 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 MIR3915-201ENST00000578518 97 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 MIR4480-201ENST00000582492 71 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AP000769.2-201ENST00000602344 396 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC104785.1-201ENST00000603220 588 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC083899.3-201ENST00000603413 594 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC006363.1-201ENST00000603806 463 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC090948.2-201ENST00000607363 564 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC243773.3-201ENST00000613270 256 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 AC099494.2-201ENST00000623371 978 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 PCMTD1P7-201ENST00000634506 357 ntBASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC144BQ3MJ40 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 SNORA56-201ENST00000383966 129 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 RPL23AP39-201ENST00000415533 405 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 RPL19P16-201ENST00000433839 588 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 VN1R10P-201ENST00000447106 875 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 RPS27AP8-201ENST00000452665 445 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms