Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.74□□□□□ -1.81
LMO4P61968 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.74□□□□□ -1.81
LMO4P61968 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.74□□□□□ -1.81
LMO4P61968 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.74□□□□□ -1.81
LMO4P61968 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.74□□□□□ -1.81
LMO4P61968 AC023050.2-201ENST00000544968 387 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.74□□□□□ -1.81
LMO4P61968 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.74□□□□□ -1.81
LMO4P61968 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.74□□□□□ -1.81
LMO4P61968 LINC00622-201ENST00000562811 1570 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 AC018552.3-201ENST00000567416 561 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.74□□□□□ -1.81
LMO4P61968 AC119751.7-201ENST00000600494 245 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AC020910.2-201ENST00000603635 610 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AL133507.1-201ENST00000605269 557 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AL158042.1-201ENST00000605338 460 ntBASIC3.74□□□□□ -1.81
LMO4P61968 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.74□□□□□ -1.81
LMO4P61968 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.74□□□□□ -1.81
LMO4P61968 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 AC015914.2-201ENST00000618167 288 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AC068831.8-201ENST00000620171 435 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AC009951.1-201ENST00000623674 2614 ntBASIC3.74□□□□□ -1.81
LMO4P61968 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LMO4P61968 LINC02211-204ENST00000642024 1070 ntBASIC3.74□□□□□ -1.81
LMO4P61968 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.74□□□□□ -1.81
LMO4P61968 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LMO4P61968 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.74□□□□□ -1.81
LMO4P61968 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 ZNF876P-202ENST00000398732 1485 ntBASIC3.73□□□□□ -1.81
LMO4P61968 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMO4P61968 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
LMO4P61968 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMO4P61968 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LMO4P61968 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
LMO4P61968 OR5P1P-201ENST00000299512 925 ntBASIC3.73□□□□□ -1.81
LMO4P61968 RNU5B-1-201ENST00000363286 116 ntBASIC3.73□□□□□ -1.81
LMO4P61968 RNU6-1214P-201ENST00000363650 109 ntBASIC3.73□□□□□ -1.81
LMO4P61968 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.73□□□□□ -1.81
LMO4P61968 RNU6-317P-201ENST00000384031 107 ntBASIC3.73□□□□□ -1.81
LMO4P61968 RNU6-636P-201ENST00000384598 107 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.73□□□□□ -1.81
LMO4P61968 AL512430.2-201ENST00000406786 339 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.73□□□□□ -1.81
LMO4P61968 AC011933.1-201ENST00000413334 321 ntBASIC3.73□□□□□ -1.81
LMO4P61968 RPL21P108-201ENST00000413857 481 ntBASIC3.73□□□□□ -1.81
LMO4P61968 RAD23BP1-201ENST00000421404 1227 ntBASIC3.73□□□□□ -1.81
LMO4P61968 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.73□□□□□ -1.81
LMO4P61968 AC009965.2-201ENST00000425328 970 ntBASIC3.73□□□□□ -1.81
LMO4P61968 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LMO4P61968 AC004975.1-201ENST00000428733 208 ntBASIC3.73□□□□□ -1.81
LMO4P61968 MTND1P20-201ENST00000430341 950 ntBASIC3.73□□□□□ -1.81
LMO4P61968 GTF2IP3-201ENST00000433887 494 ntBASIC3.73□□□□□ -1.81
LMO4P61968 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.73□□□□□ -1.81
LMO4P61968 KCTD10P1-201ENST00000434203 625 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC084290.1-201ENST00000434995 374 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.73□□□□□ -1.81
LMO4P61968 AC000041.1-201ENST00000439655 175 ntBASIC3.73□□□□□ -1.81
LMO4P61968 MTCO2P3-201ENST00000442543 421 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.73□□□□□ -1.81
LMO4P61968 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LMO4P61968 AC116533.1-201ENST00000459748 321 ntBASIC3.73□□□□□ -1.81
LMO4P61968 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LMO4P61968 RPS3AP22-201ENST00000488297 769 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC020890.1-201ENST00000491837 504 ntBASIC3.73□□□□□ -1.81
LMO4P61968 OR2A20P-203ENST00000498397 1268 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC026414.1-201ENST00000504046 698 ntBASIC3.73□□□□□ -1.81
LMO4P61968 MTND4P2-201ENST00000507767 1203 ntBASIC3.73□□□□□ -1.81
LMO4P61968 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.73□□□□□ -1.81
LMO4P61968 RNU6-1028P-201ENST00000517164 93 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.73□□□□□ -1.81
LMO4P61968 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
LMO4P61968 SMARCE1P4-201ENST00000523647 241 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC090819.1-201ENST00000523800 1111 ntBASIC3.73□□□□□ -1.81
LMO4P61968 OR4A2P-201ENST00000527276 913 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.73□□□□□ -1.81
LMO4P61968 AP002812.4-201ENST00000532139 286 ntBASIC3.73□□□□□ -1.81
LMO4P61968 MTCO2P15-201ENST00000532655 656 ntBASIC3.73□□□□□ -1.81
LMO4P61968 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.73□□□□□ -1.81
LMO4P61968 AC025260.1-201ENST00000548858 430 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.73□□□□□ -1.81
LMO4P61968 AC015912.2-201ENST00000571053 181 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.73□□□□□ -1.81
LMO4P61968 AC006272.2-201ENST00000594725 163 ntBASIC3.73□□□□□ -1.81
LMO4P61968 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.73□□□□□ -1.81
LMO4P61968 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.73□□□□□ -1.81
LMO4P61968 AC024060.1-201ENST00000607052 494 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC091979.2-201ENST00000607514 214 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.73□□□□□ -1.81
LMO4P61968 AC020634.1-201ENST00000608701 549 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC013562.2-201ENST00000611632 603 ntBASIC3.73□□□□□ -1.81
LMO4P61968 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.73□□□□□ -1.81
LMO4P61968 AP002782.1-201ENST00000623107 614 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC116563.2-201ENST00000624751 535 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms