Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NCKAP1LP55160 CR383656.6-201ENST00000550518 394 ntBASIC5.78□□□□□ -1.48
NCKAP1LP55160 GTF2IP22-201ENST00000554443 182 ntBASIC5.78□□□□□ -1.48
NCKAP1LP55160 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.78□□□□□ -1.48
NCKAP1LP55160 NIFKP8-201ENST00000560500 874 ntBASIC5.78□□□□□ -1.48
NCKAP1LP55160 UBE2FP2-201ENST00000566646 462 ntBASIC5.78□□□□□ -1.48
NCKAP1LP55160 BPTFP1-201ENST00000579209 492 ntBASIC5.78□□□□□ -1.48
NCKAP1LP55160 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.78□□□□□ -1.48
NCKAP1LP55160 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.78□□□□□ -1.48
NCKAP1LP55160 AC126915.2-201ENST00000610957 190 ntBASIC5.78□□□□□ -1.48
NCKAP1LP55160 AC002553.4-201ENST00000616896 331 ntBASIC5.78□□□□□ -1.48
NCKAP1LP55160 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.78□□□□□ -1.48
NCKAP1LP55160 AL359697.1-201ENST00000624879 587 ntBASIC5.78□□□□□ -1.48
NCKAP1LP55160 FER-210ENST00000628534 558 ntTSL 5 BASIC5.78□□□□□ -1.48
NCKAP1LP55160 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.78□□□□□ -1.48
NCKAP1LP55160 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCKAP1LP55160 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCKAP1LP55160 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
NCKAP1LP55160 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NCKAP1LP55160 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCKAP1LP55160 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NCKAP1LP55160 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCKAP1LP55160 MTND4P12-201ENST00000498999 1377 ntBASIC5.78□□□□□ -1.48
NCKAP1LP55160 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
NCKAP1LP55160 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC109315.1-201ENST00000584143 1347 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCKAP1LP55160 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCKAP1LP55160 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCKAP1LP55160 Y_RNA.302-201ENST00000364997 102 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC007068.1-201ENST00000396690 844 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 UBE2V1P3-201ENST00000439651 417 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC018638.3-201ENST00000461273 132 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 RN7SL177P-201ENST00000476596 299 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC079841.1-201ENST00000481228 950 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 RN7SL727P-201ENST00000482164 296 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 RN7SL629P-201ENST00000489622 285 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 HIGD1AP14-201ENST00000507617 282 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 ARL2BPP6-201ENST00000512757 439 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 RN7SL708P-201ENST00000580952 299 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 BNIP3P9-201ENST00000603714 553 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 AL022394.1-201ENST00000606979 292 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC024560.3-201ENST00000608482 349 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 AP002505.2-201ENST00000623585 696 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC006210.2-201ENST00000367074 1545 ntBASIC5.77□□□□□ -1.49
NCKAP1LP55160 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCKAP1LP55160 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCKAP1LP55160 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCKAP1LP55160 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCKAP1LP55160 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCKAP1LP55160 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCKAP1LP55160 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
NCKAP1LP55160 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCKAP1LP55160 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.76□□□□□ -1.49
NCKAP1LP55160 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
NCKAP1LP55160 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCKAP1LP55160 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCKAP1LP55160 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCKAP1LP55160 AC003985.2-201ENST00000562268 1669 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCKAP1LP55160 PANDAR-201ENST00000629595 1506 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 OR9K1P-201ENST00000326513 941 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.76□□□□□ -1.49
NCKAP1LP55160 Y_RNA.9-201ENST00000362354 101 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 SNORA17.1-201ENST00000362945 126 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 RNU6-660P-201ENST00000364566 109 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 RNA5SP90-201ENST00000364801 99 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 OR1L6-202ENST00000373684 1044 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 RNU1-74P-201ENST00000384108 171 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 MIR223-201ENST00000385204 110 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.76□□□□□ -1.49
NCKAP1LP55160 USP9YP20-201ENST00000419224 558 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NCKAP1LP55160 AC006065.1-201ENST00000422539 802 ntBASIC5.76□□□□□ -1.49
NCKAP1LP55160 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms