Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLTCL1P53675 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CLTCL1P53675 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLTCL1P53675 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.13□□□□□ -1.59
CLTCL1P53675 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.13□□□□□ -1.59
CLTCL1P53675 RPL21P13-201ENST00000488305 481 ntBASIC5.13□□□□□ -1.59
CLTCL1P53675 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.13□□□□□ -1.59
CLTCL1P53675 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.13□□□□□ -1.59
CLTCL1P53675 AC109458.1-201ENST00000508858 316 ntBASIC5.13□□□□□ -1.59
CLTCL1P53675 AC010285.3-201ENST00000511668 676 ntBASIC5.13□□□□□ -1.59
CLTCL1P53675 AC022882.1-201ENST00000532142 501 ntBASIC5.13□□□□□ -1.59
CLTCL1P53675 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.13□□□□□ -1.59
CLTCL1P53675 SULT1C2P2-201ENST00000562517 294 ntBASIC5.13□□□□□ -1.59
CLTCL1P53675 MIR5186-201ENST00000577504 120 ntBASIC5.13□□□□□ -1.59
CLTCL1P53675 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CLTCL1P53675 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLTCL1P53675 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLTCL1P53675 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CLTCL1P53675 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CLTCL1P53675 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLTCL1P53675 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.12□□□□□ -1.59
CLTCL1P53675 NANOGP6-201ENST00000429190 847 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CLTCL1P53675 YWHAQP9-201ENST00000445891 512 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 HMGB3P22-202ENST00000451823 572 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 AGGF1P3-201ENST00000493675 1213 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 FTH1P24-201ENST00000503502 462 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.12□□□□□ -1.59
CLTCL1P53675 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
CLTCL1P53675 RN7SKP209-201ENST00000516888 304 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.12□□□□□ -1.59
CLTCL1P53675 AC027281.1-201ENST00000574178 758 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 KLKP1-201ENST00000595979 403 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 MIR8057-201ENST00000620957 69 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLTCL1P53675 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLTCL1P53675 FRG1CP-201ENST00000358464 769 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 RNA5SP120-201ENST00000410900 112 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.12□□□□□ -1.59
CLTCL1P53675 BTF3P5-201ENST00000457252 467 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 ASNSP4-201ENST00000511103 447 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLTCL1P53675 HMGN2P47-201ENST00000559378 272 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 GTF2IP8-201ENST00000560687 584 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 AL133457.1-201ENST00000564251 987 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.12□□□□□ -1.59
CLTCL1P53675 AL732618.1-201ENST00000623251 301 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 AC127502.3-201ENST00000636170 1206 ntBASIC5.12□□□□□ -1.59
CLTCL1P53675 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.12□□□□□ -1.59
CLTCL1P53675 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.12□□□□□ -1.59
CLTCL1P53675 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLTCL1P53675 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLTCL1P53675 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.11□□□□□ -1.59
CLTCL1P53675 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.11□□□□□ -1.59
CLTCL1P53675 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLTCL1P53675 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CLTCL1P53675 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.11□□□□□ -1.59
CLTCL1P53675 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.11□□□□□ -1.59
CLTCL1P53675 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.11□□□□□ -1.59
CLTCL1P53675 U3.39-201ENST00000408569 239 ntBASIC5.11□□□□□ -1.59
CLTCL1P53675 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.11□□□□□ -1.59
CLTCL1P53675 RPL21P109-201ENST00000422213 475 ntBASIC5.11□□□□□ -1.59
CLTCL1P53675 AL512649.1-201ENST00000428997 581 ntBASIC5.11□□□□□ -1.59
CLTCL1P53675 AC099563.1-201ENST00000456086 418 ntBASIC5.11□□□□□ -1.59
CLTCL1P53675 AC010342.1-201ENST00000514047 877 ntBASIC5.11□□□□□ -1.59
CLTCL1P53675 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.11□□□□□ -1.59
CLTCL1P53675 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.11□□□□□ -1.59
CLTCL1P53675 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.11□□□□□ -1.59
CLTCL1P53675 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLTCL1P53675 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CLTCL1P53675 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLTCL1P53675 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CLTCL1P53675 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CLTCL1P53675 BMS1P3-201ENST00000372011 932 ntBASIC5.1□□□□□ -1.59
CLTCL1P53675 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.1□□□□□ -1.59
CLTCL1P53675 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.1□□□□□ -1.59
CLTCL1P53675 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.1□□□□□ -1.59
CLTCL1P53675 ATP5HP2-201ENST00000433885 485 ntBASIC5.1□□□□□ -1.59
CLTCL1P53675 ELOCP18-201ENST00000434209 337 ntBASIC5.1□□□□□ -1.59
CLTCL1P53675 RPS15AP29-201ENST00000445539 400 ntBASIC5.1□□□□□ -1.59
CLTCL1P53675 FTH1P25-201ENST00000447665 469 ntBASIC5.1□□□□□ -1.59
CLTCL1P53675 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.1□□□□□ -1.59
CLTCL1P53675 RN7SKP57-201ENST00000517248 293 ntBASIC5.1□□□□□ -1.59
CLTCL1P53675 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.1□□□□□ -1.59
CLTCL1P53675 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.1□□□□□ -1.59
CLTCL1P53675 AC068790.5-201ENST00000602741 355 ntBASIC5.1□□□□□ -1.59
CLTCL1P53675 AC115621.1-201ENST00000604653 858 ntBASIC5.1□□□□□ -1.59
CLTCL1P53675 AL163642.2-201ENST00000604722 1019 ntBASIC5.1□□□□□ -1.59
CLTCL1P53675 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.1□□□□□ -1.59
CLTCL1P53675 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLTCL1P53675 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.1□□□□□ -1.59
CLTCL1P53675 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.1□□□□□ -1.59
CLTCL1P53675 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLTCL1P53675 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLTCL1P53675 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.1□□□□□ -1.59
CLTCL1P53675 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLTCL1P53675 AC009229.4-201ENST00000623854 1947 ntBASIC5.09□□□□□ -1.59
CLTCL1P53675 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLTCL1P53675 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLTCL1P53675 RNA5SP42-201ENST00000364278 115 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms