Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.85□□□□□ -1.47
MRE11P49959 AP000526.1-201ENST00000603308 1388 ntBASIC5.85□□□□□ -1.47
MRE11P49959 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.85□□□□□ -1.47
MRE11P49959 RN7SKP113-201ENST00000363891 295 ntBASIC5.85□□□□□ -1.47
MRE11P49959 OR5H15-201ENST00000383696 930 ntBASIC5.85□□□□□ -1.47
MRE11P49959 SNORD96B-201ENST00000386148 79 ntBASIC5.85□□□□□ -1.47
MRE11P49959 RNU1-77P-201ENST00000390868 162 ntBASIC5.85□□□□□ -1.47
MRE11P49959 RPL23AP59-201ENST00000399415 461 ntBASIC5.85□□□□□ -1.47
MRE11P49959 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.85□□□□□ -1.47
MRE11P49959 MIR1193-201ENST00000408109 78 ntBASIC5.85□□□□□ -1.47
MRE11P49959 Y_RNA.604-201ENST00000410574 102 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.85□□□□□ -1.47
MRE11P49959 UBE2V1P10-201ENST00000414685 269 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.85□□□□□ -1.47
MRE11P49959 AC006065.1-201ENST00000422539 802 ntBASIC5.85□□□□□ -1.47
MRE11P49959 COX6CP13-201ENST00000428703 226 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.85□□□□□ -1.47
MRE11P49959 AL161722.2-201ENST00000434731 981 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AL354941.1-201ENST00000438600 464 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.85□□□□□ -1.47
MRE11P49959 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.85□□□□□ -1.47
MRE11P49959 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.85□□□□□ -1.47
MRE11P49959 MRPL48P1-201ENST00000445390 636 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AL672138.1-201ENST00000450604 1015 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.85□□□□□ -1.47
MRE11P49959 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.85□□□□□ -1.47
MRE11P49959 RPL7AP28-201ENST00000464513 571 ntBASIC5.85□□□□□ -1.47
MRE11P49959 RN7SL354P-201ENST00000469282 294 ntBASIC5.85□□□□□ -1.47
MRE11P49959 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
MRE11P49959 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 HIGD1AP18-201ENST00000520730 278 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.85□□□□□ -1.47
MRE11P49959 AC022882.1-201ENST00000532142 501 ntBASIC5.85□□□□□ -1.47
MRE11P49959 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.85□□□□□ -1.47
MRE11P49959 DPPA2P4-201ENST00000563717 878 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.85□□□□□ -1.47
MRE11P49959 RSL24D1P11-201ENST00000591045 491 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AC068020.1-201ENST00000594215 661 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.85□□□□□ -1.47
MRE11P49959 AC130352.1-201ENST00000602979 661 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AC020910.2-201ENST00000603635 610 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AC011374.2-201ENST00000607135 526 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AC092354.2-201ENST00000607786 514 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AC239868.4-201ENST00000608318 671 ntBASIC5.85□□□□□ -1.47
MRE11P49959 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AL359757.1-201ENST00000623176 255 ntBASIC5.85□□□□□ -1.47
MRE11P49959 AL359740.1-201ENST00000624340 592 ntBASIC5.85□□□□□ -1.47
MRE11P49959 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.85□□□□□ -1.47
MRE11P49959 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.85□□□□□ -1.47
MRE11P49959 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
MRE11P49959 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 CR381670.1-201ENST00000624291 1693 ntBASIC5.85□□□□□ -1.47
MRE11P49959 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.84□□□□□ -1.47
MRE11P49959 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MRE11P49959 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
MRE11P49959 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
MRE11P49959 VN2R3P-201ENST00000422626 1412 ntBASIC5.84□□□□□ -1.47
MRE11P49959 LINC01109-201ENST00000603837 3081 ntBASIC5.84□□□□□ -1.47
MRE11P49959 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MRE11P49959 RNU6-549P-201ENST00000384433 107 ntBASIC5.84□□□□□ -1.47
MRE11P49959 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
MRE11P49959 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.84□□□□□ -1.47
MRE11P49959 LINC01347-201ENST00000417964 355 ntBASIC5.84□□□□□ -1.47
MRE11P49959 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.84□□□□□ -1.47
MRE11P49959 AC006366.1-201ENST00000422002 759 ntBASIC5.84□□□□□ -1.47
MRE11P49959 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.84□□□□□ -1.47
MRE11P49959 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.84□□□□□ -1.47
MRE11P49959 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.84□□□□□ -1.47
MRE11P49959 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.84□□□□□ -1.47
MRE11P49959 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.84□□□□□ -1.47
MRE11P49959 MTCYBP3-201ENST00000445588 1137 ntBASIC5.84□□□□□ -1.47
MRE11P49959 AC002553.2-201ENST00000453217 340 ntBASIC5.84□□□□□ -1.47
MRE11P49959 AC034236.1-201ENST00000469891 373 ntBASIC5.84□□□□□ -1.47
MRE11P49959 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.84□□□□□ -1.47
MRE11P49959 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.84□□□□□ -1.47
MRE11P49959 AC010424.1-201ENST00000506336 297 ntBASIC5.84□□□□□ -1.47
MRE11P49959 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.84□□□□□ -1.47
MRE11P49959 snoZ278.1-201ENST00000517059 112 ntBASIC5.84□□□□□ -1.47
MRE11P49959 IGKV2-23-201ENST00000518729 323 ntBASIC5.84□□□□□ -1.47
MRE11P49959 AC060788.1-201ENST00000521318 469 ntBASIC5.84□□□□□ -1.47
MRE11P49959 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.84□□□□□ -1.47
MRE11P49959 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MRE11P49959 RPL21P7-201ENST00000557463 483 ntBASIC5.84□□□□□ -1.47
MRE11P49959 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.84□□□□□ -1.47
MRE11P49959 CYP2C60P-201ENST00000566088 139 ntBASIC5.84□□□□□ -1.47
MRE11P49959 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.84□□□□□ -1.47
MRE11P49959 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.84□□□□□ -1.47
MRE11P49959 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MRE11P49959 AC008759.1-201ENST00000589783 983 ntBASIC5.84□□□□□ -1.47
MRE11P49959 VN1R88P-201ENST00000596787 292 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms