Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.45□□□□□ -1.7
SOX2P48431 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX2P48431 SNORA2.3-201ENST00000383920 135 ntBASIC4.45□□□□□ -1.7
SOX2P48431 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 AC013442.1-201ENST00000397347 228 ntBASIC4.45□□□□□ -1.7
SOX2P48431 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX2P48431 AL589647.1-201ENST00000402485 466 ntBASIC4.45□□□□□ -1.7
SOX2P48431 RN7SKP247-201ENST00000411094 308 ntBASIC4.45□□□□□ -1.7
SOX2P48431 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.45□□□□□ -1.7
SOX2P48431 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX2P48431 AC064862.4-201ENST00000442180 334 ntBASIC4.45□□□□□ -1.7
SOX2P48431 AC004980.3-201ENST00000447046 365 ntBASIC4.45□□□□□ -1.7
SOX2P48431 RPL7L1P1-201ENST00000448259 785 ntBASIC4.45□□□□□ -1.7
SOX2P48431 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.45□□□□□ -1.7
SOX2P48431 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 AC112206.1-201ENST00000468416 477 ntBASIC4.45□□□□□ -1.7
SOX2P48431 SIAH1P1-201ENST00000479411 923 ntBASIC4.45□□□□□ -1.7
SOX2P48431 HMGB1P28-201ENST00000507778 552 ntBASIC4.45□□□□□ -1.7
SOX2P48431 MTCO2P32-201ENST00000514865 403 ntBASIC4.45□□□□□ -1.7
SOX2P48431 RNU6-488P-201ENST00000515918 99 ntBASIC4.45□□□□□ -1.7
SOX2P48431 RNU6-202P-201ENST00000515998 96 ntBASIC4.45□□□□□ -1.7
SOX2P48431 SNORD46.2-201ENST00000516021 102 ntBASIC4.45□□□□□ -1.7
SOX2P48431 RNA5SP249-201ENST00000516127 99 ntBASIC4.45□□□□□ -1.7
SOX2P48431 RNU6-941P-201ENST00000516346 108 ntBASIC4.45□□□□□ -1.7
SOX2P48431 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.45□□□□□ -1.7
SOX2P48431 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX2P48431 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX2P48431 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.45□□□□□ -1.7
SOX2P48431 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX2P48431 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.45□□□□□ -1.7
SOX2P48431 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.45□□□□□ -1.7
SOX2P48431 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX2P48431 MIR4271-201ENST00000582451 67 ntBASIC4.45□□□□□ -1.7
SOX2P48431 AC008759.1-201ENST00000589783 983 ntBASIC4.45□□□□□ -1.7
SOX2P48431 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX2P48431 AC068790.6-201ENST00000602558 258 ntBASIC4.45□□□□□ -1.7
SOX2P48431 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX2P48431 U73023.1-201ENST00000603134 700 ntBASIC4.45□□□□□ -1.7
SOX2P48431 MTCYBP22-201ENST00000603788 447 ntBASIC4.45□□□□□ -1.7
SOX2P48431 AC092354.1-201ENST00000606057 376 ntBASIC4.45□□□□□ -1.7
SOX2P48431 AP000254.1-201ENST00000609934 520 ntBASIC4.45□□□□□ -1.7
SOX2P48431 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX2P48431 AC120349.2-201ENST00000625002 298 ntBASIC4.45□□□□□ -1.7
SOX2P48431 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX2P48431 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX2P48431 AC084035.1-201ENST00000634543 607 ntBASIC4.45□□□□□ -1.7
SOX2P48431 CYP4F35P-202ENST00000636121 390 ntBASIC4.45□□□□□ -1.7
SOX2P48431 AL392088.2-201ENST00000637607 285 ntBASIC4.45□□□□□ -1.7
SOX2P48431 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SOX2P48431 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
SOX2P48431 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
SOX2P48431 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX2P48431 OR5BR1P-201ENST00000524992 1330 ntBASIC4.45□□□□□ -1.7
SOX2P48431 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SOX2P48431 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
SOX2P48431 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 AC016716.1-201ENST00000265882 708 ntBASIC4.44□□□□□ -1.7
SOX2P48431 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 U3.3-201ENST00000362986 216 ntBASIC4.44□□□□□ -1.7
SOX2P48431 RN7SKP224-201ENST00000364140 325 ntBASIC4.44□□□□□ -1.7
SOX2P48431 RNA5SP510-201ENST00000364697 99 ntBASIC4.44□□□□□ -1.7
SOX2P48431 RN7SKP292-201ENST00000365522 317 ntBASIC4.44□□□□□ -1.7
SOX2P48431 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.44□□□□□ -1.7
SOX2P48431 RNU6-1122P-201ENST00000384449 107 ntBASIC4.44□□□□□ -1.7
SOX2P48431 Y_RNA.553-201ENST00000384670 102 ntBASIC4.44□□□□□ -1.7
SOX2P48431 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 AL121978.1-201ENST00000402778 359 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC099535.1-201ENST00000408928 371 ntBASIC4.44□□□□□ -1.7
SOX2P48431 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 RNU6-648P-201ENST00000410190 107 ntBASIC4.44□□□□□ -1.7
SOX2P48431 MTCO3P41-201ENST00000414801 328 ntBASIC4.44□□□□□ -1.7
SOX2P48431 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 IPPKP1-201ENST00000422501 768 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AL049610.1-201ENST00000423374 372 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 CYCSP6-201ENST00000434498 302 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 AC012075.1-201ENST00000436549 580 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 COX6CP2-201ENST00000444980 225 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms