Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SETP5-201ENST00000437270 562 ntBASIC4.38□□□□□ -1.71
SSR1P43307 AC083863.1-201ENST00000438811 231 ntBASIC4.38□□□□□ -1.71
SSR1P43307 CBX1P1-201ENST00000440184 427 ntBASIC4.38□□□□□ -1.71
SSR1P43307 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.38□□□□□ -1.71
SSR1P43307 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.38□□□□□ -1.71
SSR1P43307 RPL35P6-201ENST00000490024 372 ntBASIC4.38□□□□□ -1.71
SSR1P43307 HMGB1P21-201ENST00000502313 581 ntBASIC4.38□□□□□ -1.71
SSR1P43307 AC025554.1-201ENST00000505641 188 ntBASIC4.38□□□□□ -1.71
SSR1P43307 AC093840.1-201ENST00000511599 336 ntBASIC4.38□□□□□ -1.71
SSR1P43307 AC034244.2-201ENST00000514668 858 ntBASIC4.38□□□□□ -1.71
SSR1P43307 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.38□□□□□ -1.71
SSR1P43307 AC104997.1-201ENST00000519761 717 ntBASIC4.38□□□□□ -1.71
SSR1P43307 TRAV8-5-201ENST00000537369 341 ntBASIC4.38□□□□□ -1.71
SSR1P43307 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.38□□□□□ -1.71
SSR1P43307 AC068831.4-201ENST00000556118 109 ntBASIC4.38□□□□□ -1.71
SSR1P43307 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.38□□□□□ -1.71
SSR1P43307 RPL23AP87-202ENST00000573039 466 ntBASIC4.38□□□□□ -1.71
SSR1P43307 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.38□□□□□ -1.71
SSR1P43307 AL451044.1-201ENST00000604867 238 ntBASIC4.38□□□□□ -1.71
SSR1P43307 BNIP3P7-201ENST00000605641 516 ntBASIC4.38□□□□□ -1.71
SSR1P43307 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.38□□□□□ -1.71
SSR1P43307 AC090246.1-201ENST00000616499 426 ntBASIC4.38□□□□□ -1.71
SSR1P43307 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.38□□□□□ -1.71
SSR1P43307 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.38□□□□□ -1.71
SSR1P43307 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SSR1P43307 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.38□□□□□ -1.71
SSR1P43307 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.38□□□□□ -1.71
SSR1P43307 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSR1P43307 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSR1P43307 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SSR1P43307 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.37□□□□□ -1.71
SSR1P43307 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.37□□□□□ -1.71
SSR1P43307 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SSR1P43307 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.37□□□□□ -1.71
SSR1P43307 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSR1P43307 MIR585-201ENST00000384887 94 ntBASIC4.37□□□□□ -1.71
SSR1P43307 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.37□□□□□ -1.71
SSR1P43307 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.37□□□□□ -1.71
SSR1P43307 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.37□□□□□ -1.71
SSR1P43307 AF228730.2-201ENST00000438784 848 ntBASIC4.37□□□□□ -1.71
SSR1P43307 RPS29P33-201ENST00000456717 146 ntBASIC4.37□□□□□ -1.71
SSR1P43307 RPS20P4-201ENST00000461659 355 ntBASIC4.37□□□□□ -1.71
SSR1P43307 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.37□□□□□ -1.71
SSR1P43307 RPL23AP14-201ENST00000468281 468 ntBASIC4.37□□□□□ -1.71
SSR1P43307 AC011276.1-201ENST00000469688 323 ntBASIC4.37□□□□□ -1.71
SSR1P43307 AC109327.1-201ENST00000471666 403 ntBASIC4.37□□□□□ -1.71
SSR1P43307 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.37□□□□□ -1.71
SSR1P43307 BNIP3P41-201ENST00000503774 571 ntBASIC4.37□□□□□ -1.71
SSR1P43307 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.37□□□□□ -1.71
SSR1P43307 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.37□□□□□ -1.71
SSR1P43307 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.37□□□□□ -1.71
SSR1P43307 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.37□□□□□ -1.71
SSR1P43307 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.37□□□□□ -1.71
SSR1P43307 AC022655.2-201ENST00000577280 318 ntBASIC4.37□□□□□ -1.71
SSR1P43307 LLPHP1-201ENST00000603571 367 ntBASIC4.37□□□□□ -1.71
SSR1P43307 AC005191.1-201ENST00000603950 358 ntBASIC4.37□□□□□ -1.71
SSR1P43307 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.37□□□□□ -1.71
SSR1P43307 RPL23AP61-201ENST00000623642 466 ntBASIC4.37□□□□□ -1.71
SSR1P43307 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.37□□□□□ -1.71
SSR1P43307 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.37□□□□□ -1.71
SSR1P43307 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSR1P43307 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.37□□□□□ -1.71
SSR1P43307 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.37□□□□□ -1.71
SSR1P43307 AC021755.1-201ENST00000559747 1447 ntBASIC4.37□□□□□ -1.71
SSR1P43307 AC073429.2-201ENST00000569694 1444 ntBASIC4.37□□□□□ -1.71
SSR1P43307 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSR1P43307 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSR1P43307 AC092326.2-201ENST00000624772 1561 ntBASIC4.36□□□□□ -1.71
SSR1P43307 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSR1P43307 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSR1P43307 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.36□□□□□ -1.71
SSR1P43307 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SSR1P43307 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
SSR1P43307 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSR1P43307 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSR1P43307 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSR1P43307 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.36□□□□□ -1.71
SSR1P43307 U3.22-201ENST00000391120 215 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.36□□□□□ -1.71
SSR1P43307 AL356806.1-201ENST00000422524 916 ntBASIC4.36□□□□□ -1.71
SSR1P43307 DNAJC19P7-201ENST00000428811 344 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AC007563.3-201ENST00000433233 371 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.36□□□□□ -1.71
SSR1P43307 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.36□□□□□ -1.71
SSR1P43307 HMGB3P8-201ENST00000449709 577 ntBASIC4.36□□□□□ -1.71
SSR1P43307 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.36□□□□□ -1.71
SSR1P43307 RAD23BP3-201ENST00000454157 1152 ntBASIC4.36□□□□□ -1.71
SSR1P43307 RPS29P22-201ENST00000472363 168 ntBASIC4.36□□□□□ -1.71
SSR1P43307 RPL21P103-201ENST00000479921 488 ntBASIC4.36□□□□□ -1.71
SSR1P43307 RN7SL459P-201ENST00000481078 302 ntBASIC4.36□□□□□ -1.71
SSR1P43307 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.36□□□□□ -1.71
SSR1P43307 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AC021087.2-201ENST00000504656 1203 ntBASIC4.36□□□□□ -1.71
SSR1P43307 PCNAP1-201ENST00000505363 709 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AC021146.7-201ENST00000509604 775 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AC008958.1-201ENST00000511047 682 ntBASIC4.36□□□□□ -1.71
SSR1P43307 RNU6-551P-201ENST00000516661 103 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AC093331.1-201ENST00000521474 169 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.36□□□□□ -1.71
SSR1P43307 AC105233.3-201ENST00000531125 744 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms