Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AGGF1P6-201ENST00000569213 976 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 MIR3160-1-201ENST00000577972 85 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.94□□□□□ -1.78
SHMT2P34897 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHMT2P34897 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.94□□□□□ -1.78
SHMT2P34897 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHMT2P34897 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.94□□□□□ -1.78
SHMT2P34897 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.94□□□□□ -1.78
SHMT2P34897 AC068831.8-201ENST00000620171 435 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SHMT2P34897 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.94□□□□□ -1.78
SHMT2P34897 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.94□□□□□ -1.78
SHMT2P34897 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHMT2P34897 AC092079.1-201ENST00000558620 1985 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.94□□□□□ -1.78
SHMT2P34897 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SHMT2P34897 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHMT2P34897 RLIMP1-201ENST00000339626 1680 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SHMT2P34897 AC009229.4-201ENST00000623854 1947 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
SHMT2P34897 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SHMT2P34897 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHMT2P34897 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SHMT2P34897 RNU6-1279P-201ENST00000383917 103 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.93□□□□□ -1.78
SHMT2P34897 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.93□□□□□ -1.78
SHMT2P34897 RN7SKP263-201ENST00000411194 309 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.93□□□□□ -1.78
SHMT2P34897 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SHMT2P34897 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.93□□□□□ -1.78
SHMT2P34897 CR848007.2-201ENST00000424918 787 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 MTND4LP14-201ENST00000429447 288 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 MTCO3P21-201ENST00000430791 643 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.93□□□□□ -1.78
SHMT2P34897 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.93□□□□□ -1.78
SHMT2P34897 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.93□□□□□ -1.78
SHMT2P34897 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SHMT2P34897 MTCYBP12-201ENST00000440559 1134 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 AC023512.1-201ENST00000444513 499 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 AC006326.1-201ENST00000445465 787 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 AL162151.2-201ENST00000448875 158 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.93□□□□□ -1.78
SHMT2P34897 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
SHMT2P34897 AC110792.1-201ENST00000491826 472 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.93□□□□□ -1.78
SHMT2P34897 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.93□□□□□ -1.78
SHMT2P34897 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHMT2P34897 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.93□□□□□ -1.78
SHMT2P34897 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.93□□□□□ -1.78
SHMT2P34897 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.93□□□□□ -1.78
SHMT2P34897 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.93□□□□□ -1.78
SHMT2P34897 AP006248.2-201ENST00000623309 592 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 AL118508.4-201ENST00000624142 1176 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 RNA5SP196-201ENST00000625967 102 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SHMT2P34897 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHMT2P34897 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.93□□□□□ -1.78
SHMT2P34897 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.93□□□□□ -1.78
SHMT2P34897 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHMT2P34897 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SHMT2P34897 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHMT2P34897 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHMT2P34897 AL627171.1-201ENST00000618845 1308 ntBASIC3.93□□□□□ -1.78
SHMT2P34897 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.93□□□□□ -1.78
SHMT2P34897 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SHMT2P34897 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SHMT2P34897 AC095050.2-201ENST00000510748 1458 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHMT2P34897 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.92□□□□□ -1.78
SHMT2P34897 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.92□□□□□ -1.78
SHMT2P34897 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHMT2P34897 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.92□□□□□ -1.78
SHMT2P34897 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.92□□□□□ -1.78
SHMT2P34897 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SHMT2P34897 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHMT2P34897 RN7SKP44-201ENST00000363602 316 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.92□□□□□ -1.78
SHMT2P34897 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHMT2P34897 PPIAP31-201ENST00000405422 495 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.92□□□□□ -1.78
SHMT2P34897 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 AL691449.1-201ENST00000426570 421 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 RPL7P4-203ENST00000430239 730 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 AL117339.2-201ENST00000430475 180 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.92□□□□□ -1.78
SHMT2P34897 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SHMT2P34897 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.92□□□□□ -1.78
SHMT2P34897 RPS15AP29-201ENST00000445539 400 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 AL645939.1-201ENST00000453429 797 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 AC025181.1-201ENST00000477507 416 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 OR52A4P-202ENST00000481634 799 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 AC069499.1-201ENST00000489433 509 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.92□□□□□ -1.78
SHMT2P34897 RPL31P61-201ENST00000496160 376 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 MTCO1P31-201ENST00000506355 492 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.92□□□□□ -1.78
SHMT2P34897 MIR2114-201ENST00000516645 80 ntBASIC3.92□□□□□ -1.78
SHMT2P34897 HMGB1P46-201ENST00000520062 610 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms