Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC093524.1-201ENST00000564266 1094 ntBASIC5.22□□□□□ -1.57
CPS1P31327 MIR7851-201ENST00000610611 160 ntBASIC5.22□□□□□ -1.57
CPS1P31327 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CPS1P31327 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CPS1P31327 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.21□□□□□ -1.57
CPS1P31327 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
CPS1P31327 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CPS1P31327 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CPS1P31327 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CPS1P31327 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CPS1P31327 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.21□□□□□ -1.58
CPS1P31327 BMS1P3-201ENST00000372011 932 ntBASIC5.21□□□□□ -1.58
CPS1P31327 OR51A6P-201ENST00000418680 1004 ntBASIC5.21□□□□□ -1.58
CPS1P31327 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.21□□□□□ -1.58
CPS1P31327 AC093663.1-201ENST00000497190 394 ntBASIC5.21□□□□□ -1.58
CPS1P31327 AC023141.12-201ENST00000512399 199 ntBASIC5.21□□□□□ -1.58
CPS1P31327 CYP4A43P-201ENST00000568156 121 ntBASIC5.21□□□□□ -1.58
CPS1P31327 MIR5680-201ENST00000577577 84 ntBASIC5.21□□□□□ -1.58
CPS1P31327 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.21□□□□□ -1.58
CPS1P31327 RPL12P50-201ENST00000603116 116 ntBASIC5.21□□□□□ -1.58
CPS1P31327 AL133247.2-201ENST00000603236 482 ntBASIC5.21□□□□□ -1.58
CPS1P31327 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.21□□□□□ -1.58
CPS1P31327 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.21□□□□□ -1.58
CPS1P31327 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.21□□□□□ -1.58
CPS1P31327 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CPS1P31327 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.2□□□□□ -1.58
CPS1P31327 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CPS1P31327 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CPS1P31327 SMG1P4-204ENST00000523028 4131 ntBASIC5.2□□□□□ -1.58
CPS1P31327 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CPS1P31327 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CPS1P31327 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CPS1P31327 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.2□□□□□ -1.58
CPS1P31327 HSPE1P27-201ENST00000430808 296 ntBASIC5.2□□□□□ -1.58
CPS1P31327 RPS15AP29-201ENST00000445539 400 ntBASIC5.2□□□□□ -1.58
CPS1P31327 AC017037.1-201ENST00000508460 471 ntBASIC5.2□□□□□ -1.58
CPS1P31327 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.2□□□□□ -1.58
CPS1P31327 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.2□□□□□ -1.58
CPS1P31327 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.2□□□□□ -1.58
CPS1P31327 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CPS1P31327 ZNF807-201ENST00000328088 1707 ntBASIC5.2□□□□□ -1.58
CPS1P31327 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CPS1P31327 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CPS1P31327 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CPS1P31327 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CPS1P31327 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.19□□□□□ -1.58
CPS1P31327 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.19□□□□□ -1.58
CPS1P31327 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPS1P31327 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPS1P31327 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CPS1P31327 IL6STP1-201ENST00000346911 1020 ntBASIC5.19□□□□□ -1.58
CPS1P31327 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.19□□□□□ -1.58
CPS1P31327 AC117434.1-201ENST00000419971 836 ntBASIC5.19□□□□□ -1.58
CPS1P31327 NPM1P25-201ENST00000429734 854 ntBASIC5.19□□□□□ -1.58
CPS1P31327 RPL26P28-201ENST00000451325 435 ntBASIC5.19□□□□□ -1.58
CPS1P31327 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.19□□□□□ -1.58
CPS1P31327 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.19□□□□□ -1.58
CPS1P31327 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.19□□□□□ -1.58
CPS1P31327 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CPS1P31327 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.19□□□□□ -1.58
CPS1P31327 AL606834.2-201ENST00000602954 668 ntBASIC5.19□□□□□ -1.58
CPS1P31327 AC136601.2-201ENST00000604356 474 ntBASIC5.19□□□□□ -1.58
CPS1P31327 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.19□□□□□ -1.58
CPS1P31327 UBE3AP2-201ENST00000429033 2259 ntBASIC5.19□□□□□ -1.58
CPS1P31327 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CPS1P31327 FAM35BP-202ENST00000497389 3337 ntBASIC5.19□□□□□ -1.58
CPS1P31327 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CPS1P31327 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPS1P31327 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC5.19□□□□□ -1.58
CPS1P31327 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPS1P31327 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.19□□□□□ -1.58
CPS1P31327 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CPS1P31327 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.19□□□□□ -1.58
CPS1P31327 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CPS1P31327 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CPS1P31327 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CPS1P31327 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CPS1P31327 AL035458.1-201ENST00000433096 585 ntBASIC5.18□□□□□ -1.58
CPS1P31327 SNORA71B-202ENST00000439232 272 ntBASIC5.18□□□□□ -1.58
CPS1P31327 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.18□□□□□ -1.58
CPS1P31327 RN7SL504P-201ENST00000494496 287 ntBASIC5.18□□□□□ -1.58
CPS1P31327 ARL4AP1-201ENST00000503220 705 ntBASIC5.18□□□□□ -1.58
CPS1P31327 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.18□□□□□ -1.58
CPS1P31327 AC090877.1-201ENST00000561418 344 ntBASIC5.18□□□□□ -1.58
CPS1P31327 MTND6P33-201ENST00000571794 183 ntBASIC5.18□□□□□ -1.58
CPS1P31327 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
CPS1P31327 AC006116.10-201ENST00000591836 581 ntBASIC5.18□□□□□ -1.58
CPS1P31327 AP000255.1-201ENST00000610276 676 ntBASIC5.18□□□□□ -1.58
CPS1P31327 AL162274.2-201ENST00000614406 332 ntBASIC5.18□□□□□ -1.58
CPS1P31327 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC5.18□□□□□ -1.58
CPS1P31327 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.18□□□□□ -1.58
CPS1P31327 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CPS1P31327 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CPS1P31327 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CPS1P31327 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CPS1P31327 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CPS1P31327 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.18□□□□□ -1.58
CPS1P31327 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
CPS1P31327 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CPS1P31327 AC125336.1-201ENST00000508893 2827 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms