Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MRPL49P2-201ENST00000521066 465 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.68□□□□□ -1.66
HOXC13P31276 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC13P31276 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC13P31276 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC13P31276 AC007424.1-203ENST00000554613 687 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AC093510.2-201ENST00000562820 896 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC13P31276 AC091178.1-203ENST00000584586 279 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AC008507.2-201ENST00000588402 1176 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AC005255.1-201ENST00000593748 216 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AC090181.2-201ENST00000602975 672 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 BPIFA4P-203ENST00000603168 689 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
HOXC13P31276 AC034229.4-201ENST00000607861 441 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 SNORD91B-202ENST00000608459 222 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AC140113.4-201ENST00000622087 222 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AC097520.1-201ENST00000624435 385 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC13P31276 U6.107-201ENST00000637108 79 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 FAM157B-203ENST00000639350 358 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AC046144.1-201ENST00000478559 1853 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC13P31276 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC13P31276 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HOXC13P31276 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
HOXC13P31276 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC13P31276 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HOXC13P31276 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC13P31276 RNU1-130P-201ENST00000363930 160 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 RNA5SP171-201ENST00000391071 115 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC13P31276 HMGB3P18-201ENST00000406327 590 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 RNU4-27P-201ENST00000410889 139 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 VDAC1P9-201ENST00000412766 841 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 HMGB3P31-201ENST00000413333 595 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AL158825.1-201ENST00000414735 521 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 RPL36AP36-201ENST00000418616 301 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC13P31276 AL356387.2-201ENST00000422272 243 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 OR5AW1P-201ENST00000426334 1006 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 RPS26P40-201ENST00000435209 294 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC13P31276 HMGB1P48-201ENST00000446155 598 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 RPL7P55-201ENST00000450522 746 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 RNA5SP103-201ENST00000459503 118 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AC105137.1-201ENST00000484355 562 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AC041039.1-201ENST00000485656 536 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 RN7SL604P-201ENST00000492589 296 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC13P31276 AC090071.1-201ENST00000507713 644 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.67□□□□□ -1.66
HOXC13P31276 AC015795.1-201ENST00000513669 327 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 Vault.1-201ENST00000516474 102 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC13P31276 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC13P31276 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC13P31276 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC13P31276 AC104229.1-201ENST00000561364 255 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC13P31276 MTND4LP25-201ENST00000570218 163 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AC125494.3-201ENST00000602759 455 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AP002360.3-201ENST00000607673 710 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AC026368.1-201ENST00000614934 690 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 RMST_10.1-201ENST00000616309 154 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AC011978.2-201ENST00000569835 2054 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 AC008432.1-201ENST00000615912 1320 ntBASIC4.67□□□□□ -1.66
HOXC13P31276 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HOXC13P31276 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC13P31276 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC13P31276 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HOXC13P31276 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
HOXC13P31276 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC13P31276 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC13P31276 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC13P31276 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC13P31276 HSPD1P14-201ENST00000432666 1618 ntBASIC4.66□□□□□ -1.66
HOXC13P31276 OR4K17-201ENST00000315543 1032 ntBASIC4.66□□□□□ -1.66
HOXC13P31276 MIR372-201ENST00000362225 67 ntBASIC4.66□□□□□ -1.66
HOXC13P31276 RNA5SP27-201ENST00000363839 119 ntBASIC4.66□□□□□ -1.66
HOXC13P31276 SNORA70C-201ENST00000384538 135 ntBASIC4.66□□□□□ -1.66
HOXC13P31276 ATP5F1P6-201ENST00000402768 767 ntBASIC4.66□□□□□ -1.66
HOXC13P31276 FCF1P5-201ENST00000406490 482 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms