Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CFTRP13569 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CFTRP13569 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.08□□□□□ -1.44
CFTRP13569 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.08□□□□□ -1.44
CFTRP13569 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC6.08□□□□□ -1.44
CFTRP13569 NANOGNBP1-201ENST00000448444 480 ntBASIC6.08□□□□□ -1.44
CFTRP13569 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.08□□□□□ -1.44
CFTRP13569 AC021146.3-201ENST00000511911 260 ntBASIC6.08□□□□□ -1.44
CFTRP13569 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.08□□□□□ -1.44
CFTRP13569 AC034105.3-201ENST00000565294 442 ntBASIC6.08□□□□□ -1.44
CFTRP13569 AC007066.2-202ENST00000566531 914 ntBASIC6.08□□□□□ -1.44
CFTRP13569 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.08□□□□□ -1.44
CFTRP13569 AC006386.2-201ENST00000624491 75 ntBASIC6.08□□□□□ -1.44
CFTRP13569 AC012005.1-201ENST00000624575 75 ntBASIC6.08□□□□□ -1.44
CFTRP13569 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CFTRP13569 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CFTRP13569 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.07□□□□□ -1.44
CFTRP13569 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CFTRP13569 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CFTRP13569 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CFTRP13569 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CFTRP13569 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CFTRP13569 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.07□□□□□ -1.44
CFTRP13569 AC069285.2-201ENST00000440210 275 ntBASIC6.07□□□□□ -1.44
CFTRP13569 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.07□□□□□ -1.44
CFTRP13569 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.07□□□□□ -1.44
CFTRP13569 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.07□□□□□ -1.44
CFTRP13569 SUMO2P20-201ENST00000520803 283 ntBASIC6.07□□□□□ -1.44
CFTRP13569 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.07□□□□□ -1.44
CFTRP13569 AC113192.3-201ENST00000529152 742 ntBASIC6.07□□□□□ -1.44
CFTRP13569 AC005476.1-201ENST00000554427 397 ntBASIC6.07□□□□□ -1.44
CFTRP13569 TRAV15-201ENST00000556680 249 ntBASIC6.07□□□□□ -1.44
CFTRP13569 AC128687.2-201ENST00000609657 566 ntBASIC6.07□□□□□ -1.44
CFTRP13569 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.07□□□□□ -1.44
CFTRP13569 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CFTRP13569 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC6.06□□□□□ -1.44
CFTRP13569 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.06□□□□□ -1.44
CFTRP13569 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CFTRP13569 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CFTRP13569 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.06□□□□□ -1.44
CFTRP13569 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CFTRP13569 HCFC2P1-201ENST00000392864 1592 ntBASIC6.06□□□□□ -1.44
CFTRP13569 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CFTRP13569 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CFTRP13569 GSTM3P2-201ENST00000412746 530 ntBASIC6.06□□□□□ -1.44
CFTRP13569 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.06□□□□□ -1.44
CFTRP13569 CCRL1P1-201ENST00000449542 1053 ntBASIC6.06□□□□□ -1.44
CFTRP13569 AC099563.1-201ENST00000456086 418 ntBASIC6.06□□□□□ -1.44
CFTRP13569 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC6.06□□□□□ -1.44
CFTRP13569 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.06□□□□□ -1.44
CFTRP13569 AC069306.1-201ENST00000507006 843 ntBASIC6.06□□□□□ -1.44
CFTRP13569 RNA5SP341-201ENST00000516261 117 ntBASIC6.06□□□□□ -1.44
CFTRP13569 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.06□□□□□ -1.44
CFTRP13569 MIR4276-201ENST00000584832 70 ntBASIC6.06□□□□□ -1.44
CFTRP13569 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC6.06□□□□□ -1.44
CFTRP13569 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CFTRP13569 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CFTRP13569 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC6.06□□□□□ -1.44
CFTRP13569 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC6.05□□□□□ -1.44
CFTRP13569 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CFTRP13569 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CFTRP13569 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.05□□□□□ -1.44
CFTRP13569 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CFTRP13569 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CFTRP13569 HLFP1-201ENST00000402375 499 ntBASIC6.05□□□□□ -1.44
CFTRP13569 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.05□□□□□ -1.44
CFTRP13569 ATP6V0E1P4-201ENST00000427294 242 ntBASIC6.05□□□□□ -1.44
CFTRP13569 TPTE2P3-201ENST00000441562 1189 ntBASIC6.05□□□□□ -1.44
CFTRP13569 AC098824.1-201ENST00000453565 980 ntBASIC6.05□□□□□ -1.44
CFTRP13569 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.05□□□□□ -1.44
CFTRP13569 AC084036.1-201ENST00000609190 508 ntBASIC6.05□□□□□ -1.44
CFTRP13569 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.05□□□□□ -1.44
CFTRP13569 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CFTRP13569 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CFTRP13569 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CFTRP13569 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CFTRP13569 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CFTRP13569 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CFTRP13569 AC119744.1-201ENST00000454746 1715 ntBASIC6.04□□□□□ -1.44
CFTRP13569 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.04□□□□□ -1.44
CFTRP13569 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC6.04□□□□□ -1.44
CFTRP13569 AC107083.1-201ENST00000439643 279 ntBASIC6.04□□□□□ -1.44
CFTRP13569 UBTFL9-201ENST00000534504 1148 ntBASIC6.04□□□□□ -1.44
CFTRP13569 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.04□□□□□ -1.44
CFTRP13569 AC006504.3-201ENST00000586818 523 ntBASIC6.04□□□□□ -1.44
CFTRP13569 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.04□□□□□ -1.44
CFTRP13569 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CFTRP13569 FAM35BP-202ENST00000497389 3337 ntBASIC6.04□□□□□ -1.44
CFTRP13569 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC6.04□□□□□ -1.44
CFTRP13569 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CFTRP13569 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CFTRP13569 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CFTRP13569 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CFTRP13569 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC6.04□□□□□ -1.44
CFTRP13569 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CFTRP13569 FRG1CP-201ENST00000358464 769 ntBASIC6.03□□□□□ -1.44
CFTRP13569 SNORA44-201ENST00000384584 132 ntBASIC6.03□□□□□ -1.44
CFTRP13569 RPL5P23-201ENST00000496040 868 ntBASIC6.03□□□□□ -1.44
CFTRP13569 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC6.03□□□□□ -1.44
CFTRP13569 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms